| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1099 |
|---|
| Symbol | |
|---|
| ID | 5108072 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 1235125 |
|---|
| End bp | 1236381 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640502323 |
|---|
| Product | cyanophycinase |
|---|
| Protein accession | YP_001186598 |
|---|
| Protein GI | 146306133 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG4242] Cyanophycinase and related exopeptidases |
|---|
| TIGRFAM ID | [TIGR02069] cyanophycinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.517521 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.0298062 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGGAT CGGTTATTCG TTACACCCTC ATGCTGGCTC TTCTGTTACC GCTGCCGGCC
CTGGCGGCCG GCCCGCTGCT GCTGGTGGGC GGCGGGCTCA AGGACGACAA CGCGGTCATC
TACCAACGTC TGGTGCAGCT GGCCGGCGGC AGTCAGGCGC GCATCGGCGT GATCACCGCC
GCCTCGATTC CACCGAGCCA GGACCCCGAC GCCGGCACCG CCAACGCGCG CAACTCCAAG
TCCAATGGCG AGTTCTACGC ACAGCTGCTG AAGACCTACG GCGCCCAGGA TGCCCAGTGG
ATCCCCATCG ACCTGGACAG CATCGGCAAC AACAGCAACC CGCAGGTGAT CGCGCAGATC
AACGGCATGA CCGGCTTCTT CTTCGGCGGC GGCGACCAGG CGCGCCTTAC CCAGACGCTG
CAGACCGCAA CGCGCGCCGA CACGCCGGCA CTGGCCGCGA TTCGCGCCCG GCACGCTGCC
GGCGCCGTGC TCGCCGGCAG CAGCGCGGGA ACCGCGATCA TGGTCGGCGG GCCGATGATC
ACCGGCGGCG AGAGCTATCC CGCTCTGCGC TACGGCGTCT ACACCACCCC GGGCGGTGAT
GACCTGTCCT ACGACATGCA GGGCGGTTTC GGCTTCTTCA GCCATGGCCT GCTCGACACC
CATTTCAGCG AGCGCGGCCG TCAGGGGCGC ATCGTGCGCC TGGCCGACTA CACCAACGTG
CCGTTCGCCT ACGGCGTCGA CGAGGACACC GCGCTGCTGG TGCAGCAGAA CCCCAGCCTC
GGCCAGGTGG AGATGGAGGT GCTCGGCAGC AACGGCGTGT TCATCTTCGA CCTGCGCAAC
AAGCAGCGTG GCACCGGCAG CAGCTACGCC CTCTACGACG TGCTGGCCAG CTACCTGACC
GCCGGCGACC GCTACCGCCC GGCCAATCAG CAGTTCGTGA TCGCCAGCGG CAAGACCAGC
CTGCGTGGGC GCGAGTACTA CAGCTCGGCG ATGACCGCCA CCGGCGACAT CTTCAGCAGC
CCGAACAACA GCGGTGCCAA CGGCCGACGC AACCCGCGCG AGTTCGTCAA GGTCAGCACC
GACCTGTTCG ACAGCCGCTC GACCAGCACC CTGGGCCGCA CCTACGAAAG CAATCCGCGT
TTCCGCGTCG ACCTGATCAA GAGCACCACC TTCGACAGTC ACGGCTATCA GGGGGTTATC
AACGGCAAGC GCCTGACCTC CTATCTGCGT CTGCGCGTGG ATATGCGCCC CAACTGA
|
|---|
| Protein sequence | MIGSVIRYTL MLALLLPLPA LAAGPLLLVG GGLKDDNAVI YQRLVQLAGG SQARIGVITA
ASIPPSQDPD AGTANARNSK SNGEFYAQLL KTYGAQDAQW IPIDLDSIGN NSNPQVIAQI
NGMTGFFFGG GDQARLTQTL QTATRADTPA LAAIRARHAA GAVLAGSSAG TAIMVGGPMI
TGGESYPALR YGVYTTPGGD DLSYDMQGGF GFFSHGLLDT HFSERGRQGR IVRLADYTNV
PFAYGVDEDT ALLVQQNPSL GQVEMEVLGS NGVFIFDLRN KQRGTGSSYA LYDVLASYLT
AGDRYRPANQ QFVIASGKTS LRGREYYSSA MTATGDIFSS PNNSGANGRR NPREFVKVST
DLFDSRSTST LGRTYESNPR FRVDLIKSTT FDSHGYQGVI NGKRLTSYLR LRVDMRPN
|
|---|
| |