| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1095 |
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| Symbol | |
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| ID | 5108068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1230548 |
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| End bp | 1232311 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640502319 |
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| Product | cyanophycinase-like protein |
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| Protein accession | YP_001186594 |
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| Protein GI | 146306129 |
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| COG category | [P] Inorganic ion transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4242] Cyanophycinase and related exopeptidases |
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| TIGRFAM ID | [TIGR02069] cyanophycinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.092083 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.0870185 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAGC AGCGCAACCT TCGTGGCCTT CTCGCCGCGC TTATCCTCTG CGGCAGTGCC
GATCAGGTAC TGGCCGACGG CAATCTCCTC GCGGTCGGCG GCATGCTGCG AGCCAGCAAC
AGCCTGGTCT ACGAGAAACT CATCGAACTG GCGGGCGGCG CCGAGCAGGC GCGCATCGCC
ATCATGCCCA CCGCCAGCGG CAGCCTGGGC TCCAGCAAGC GCTTTCAGGC CGAGCTGGAA
GCCCTGGGCG TGCCCGCCGA GCACATCCGC ATCGTCGGCA TCGACCGCCA CAACTACCAG
GACACCATGA ACGACCCTGC GGTGGTCGCG CCGCTGCGCG AGGCCAGTGC GGTGTGGTTC
GTCGGCGGTG ATCAGGCGCG CATCGCCCGC GCGCTGTTCA ACGCCGACGG CAGCCCGTCG
CTGGCCATGC AGGCCGTGCA GGCGATCTAC GACAAGGGCG GCGTGGTGGC CGGTACCAGC
GCCGGGGCCA GCATCCTCGG TGCGCGCATG CCCACCGCCT ACGGGGTGGT CATGGACACC
CTGGATTTCG GCGTGGCCAC GGCCGAGGGG CGACGCGGCA CCGCCCTGCT CAGGGGCGCT
GGCCTGTTCA AGGCCGGCGT GATCGACCAG CACTTCGACA AGATCGAGGA AACCAGCAGC
GGGCGCGCGG CGCGCATGGC CAGCTACCTG CTGGAGCAGC CGGCTCCGGG CAAGGGCTTC
GGTCTGGATA CCAACACCGC CATGTGGATC AAGCCCAGTG GCGAGCTGGA GGTACTGGGC
GAGGGCTACC TGACCATCAT GGACCCTGCC GCGGCGAAGA AGAGCTTCGG GCTCTACGGC
ACGCGCATCG ACGACATGCG CCTGGCCATG CTCGGTCATG GCGATCGCTA CGACCTGGCC
TCGGGCGAGA TCCGGCCGGA TGCCGGCAAG CAGCCGATCG AGCCTGGCAA CGAGTACCTG
GTGGGCAACC GCCTGCTCAC CGACCTGTCG GCCGTGTCGG CGATCAACCG GGCGGTGCTC
TATGGCCTGG CCGACAACAC GGCGAGCCGT CAGCTCGGGC TGATGACCCG CTACAACCCG
GCCAACGGCT ACCACTACGG CTATCGCTTC GAGTTCAGCA AGCGTGCGGA CTTTGCCGCC
CACAGCCGCT TCCACGATTC GCAGACCAAC TACAGCGTCA GCGGCGTGCG CCTGGACATC
CGTCCGGTGA CCGCCGATCT GCGCGAGCCG GCCGCCGGCG CCCCGCGTGA TGCCGGCAAC
GGCCGCCGCG GCGACGCCAT TCGTGCGGTG ACCTTCCGCG GCCTGATGAC CCTCAATGCC
GAGGGCGCCT TCGAGGCGGA GCGCCCGATC ACCCGCGGCG AGCTGGCCAA TGCCCTGCAG
ATGACCCTGG CTGCGGAGCC CAACCTCAAG GCCCTGCCGA CGCTGAGCGA CGTACCGGCC
GAGCATCCGC TGCGCGAGCA TATCGAGGTG GTGGTTTCCA ACGGCTGGAT GGATGGTGCC
GAGCGCTTCG ATGCCCAGCG GCCGGCCAGC CGCGCGGACT GGGCGCTGGC CTGCAAGACG
CTGGTCGAGC GCTTCAGCGG GACCACGCTG AACAAGACCG TGGCGCTGCA GGACGTCGCC
GGCCTCGCTG CGCCGAACGC CGAGGCTGCC GCGCAGACCG TGGCCGAAGG TTGGCTGAGC
GCCAACCAGG GACGCTTCGA GCCCGCTGCG CCGGTCAAGC GCGCCGAGGT CGCCGAGACC
CTGGCGCGCA TCATCGGCCT CTAG
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| Protein sequence | MNKQRNLRGL LAALILCGSA DQVLADGNLL AVGGMLRASN SLVYEKLIEL AGGAEQARIA
IMPTASGSLG SSKRFQAELE ALGVPAEHIR IVGIDRHNYQ DTMNDPAVVA PLREASAVWF
VGGDQARIAR ALFNADGSPS LAMQAVQAIY DKGGVVAGTS AGASILGARM PTAYGVVMDT
LDFGVATAEG RRGTALLRGA GLFKAGVIDQ HFDKIEETSS GRAARMASYL LEQPAPGKGF
GLDTNTAMWI KPSGELEVLG EGYLTIMDPA AAKKSFGLYG TRIDDMRLAM LGHGDRYDLA
SGEIRPDAGK QPIEPGNEYL VGNRLLTDLS AVSAINRAVL YGLADNTASR QLGLMTRYNP
ANGYHYGYRF EFSKRADFAA HSRFHDSQTN YSVSGVRLDI RPVTADLREP AAGAPRDAGN
GRRGDAIRAV TFRGLMTLNA EGAFEAERPI TRGELANALQ MTLAAEPNLK ALPTLSDVPA
EHPLREHIEV VVSNGWMDGA ERFDAQRPAS RADWALACKT LVERFSGTTL NKTVALQDVA
GLAAPNAEAA AQTVAEGWLS ANQGRFEPAA PVKRAEVAET LARIIGL
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