| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1090 |
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| Symbol | |
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| ID | 5108063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1226019 |
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| End bp | 1226783 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640502314 |
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| Product | ABC transporter related |
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| Protein accession | YP_001186589 |
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| Protein GI | 146306124 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4598] ABC-type histidine transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.455467 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.0958562 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACAAAC TCGAAGTTCA GGATCTGCAC AAACGCTACG GTAGCCACGA GGTGATCCGC
GGCGTATCGA TGGCTGCCAA GGCCGGCGAC GTGATCAGCA TCATCGGCTC CAGCGGCTCG
GGCAAGAGCA CTTTCCTGCG CTGCATCAAC CTGCTGGAGC AGCCGCATGC CGGCCGCATC
CAGCTCAATG GCGAAGAGCT CAGGCTGGTC GCCAATCGCG GCGGCGCGCT CAAGGCCGCC
GACGCCAAAC AGCTGCAGCG CATGCGCTCG CGCCTGTCGA TGGTGTTCCA GAACTTCAAC
CTGTGGTCGC ACATGAGCGC CCTGGACAAC GTCATGGAGG CGCCGGTGCA CGTGCTCGGC
CAGAGCAAGG CCGAGGCGCG CGACAGGGCC GAGCACTACC TGGCCAAGGT CGGCGTGGCG
CACCGCAAGG ACGCCTACCC GGCGCACATG TCCGGCGGCG AGCAGCAGCG CGTGGCCATC
GCCCGCGCCC TGGCCATGGA GCCGGAGGTG ATGCTGTTCG ACGAGCCCAC CTCGGCCCTC
GACCCGGAGC TGGTCGGCGA GGTGCTCAAG GTCATGCAGG ATCTGGCCAG CGAGGGTCGC
ACCATGGTGG TGGTGACCCA CGAAATGGGC TTTGCCCGCG AGGTGTCCAA CCAGCTGGTG
TTCCTGCACA AGGGCCTGGT GGAAGAACAG GGCCACCCGC GCGAGGTGTT GGCCAACCCG
CAGTCCGAGC GCCTGCAGCA GTTTCTCTGC GGCAGCCTCA AGTAA
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| Protein sequence | MYKLEVQDLH KRYGSHEVIR GVSMAAKAGD VISIIGSSGS GKSTFLRCIN LLEQPHAGRI
QLNGEELRLV ANRGGALKAA DAKQLQRMRS RLSMVFQNFN LWSHMSALDN VMEAPVHVLG
QSKAEARDRA EHYLAKVGVA HRKDAYPAHM SGGEQQRVAI ARALAMEPEV MLFDEPTSAL
DPELVGEVLK VMQDLASEGR TMVVVTHEMG FAREVSNQLV FLHKGLVEEQ GHPREVLANP
QSERLQQFLC GSLK
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