| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1071 |
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| Symbol | |
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| ID | 5107730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1207957 |
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| End bp | 1209390 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640502295 |
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| Product | deoxyribodipyrimidine photo-lyase type I |
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| Protein accession | YP_001186570 |
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| Protein GI | 146306105 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAAC TGATGTGGTT CCGCAGCGAC CTGCGGATCG ATGACAACAC CGCGCTGAGC
CAGGCCATGA GCAGGGGCTC GACCATAGCG CTGTACCTGG TCACCCCCGG CCAGTGGCAG
CGCCATGACG ATGCCCCGTG CAAGGTCGAC TTCTGGCTGC GCAACCTGGC CCATCTGAGC
CGGGCGCTGG CCGCCCTCAA CGTGCCGTTG CTGATTCGTC AGTGCGAGGA CTGGAACCAG
GCGCCGGCCG TGATCGCCGA GGTCTGCCAC CAGCACAACG TCTGCGCGGT GCATGCCAAC
GAGGAGTACG GCATCAACGA AAACCTGCGC GACCGCTGCG TGGCCGCCTA CCTGGCCCAG
CAGGACATCG CCTGGCACAG CCATCTCGAC CAGCTGCTGT TCAAGCCCGG CAGCATCCTG
ACCCGCTCCG GCGGCTACTT CCAGGTCTAC AGCCAGTTCC GCAAGGTCTG CTACGAGCAC
CTGCACATGG CCCTGCCCGG CCTGGTCGCC CGGCCCGTGG CGCAGGCGCC CACGCCCCTC
GCCAGCGACG CGATTCCCCA TGCCGTGGAC GGCTTCGCGA TGCCCAGCGA GCAGCTGCGC
AGCCTCTGGC CGGCCGGCGA AGAGGCCGCC CGCCAGCGCC TGGAGCGCTT CGCCGACGAG
CAGATCGGCT ACTACAAGGA CGAACGCGAC TTCCCCGCGC TGCCCGGCAC CAGCCAGCTC
TCGCCCTACC TGGCAGCCGG CGTGCTGTCG CCGCGTCAAT GCCTGCACGC CGCACTGGCC
GCCAACCGCG GCGAGTTCGA CAGCGGCAAT GCGGGCGTCG TCACCTGGGT CAACGAACTG
CTCTGGCGCG AGTTCTACAA GCACATTCTG GTGGGCTACC CGCGCGTCTC GCGGCATCGC
GCCTTCCGCC CGGAAACCGA AGCCGTGGCC TGGCGCCGCG CGCCCGAGGA ACTGGCCGCC
TGGCAGCAGG GCCGCACCGG CCTGCCGATC ATCGATGCCG CCATGCGCCA GCTGCTCGAG
ACCGGCTGGA TGCACAACCG CCTGCGCATG ATCGTCGCCA TGTTCCTGAC CAAGAACCTG
CTGATCGACT GGCGCGAGGG CGAGCGCTTC TTCATGCGCC ACCTGATCGA CGGCGACCTG
GCCGCGAACA ATGGCGGCTG GCAGTGGAGC GCCTCTACCG GTACCGATGC GGCGCCCTAC
TTCCGCATCT TCAACCCCAT CAGCCAGTCG CAGAAATTCG ACTCCGAGGG ACGCTTCATC
CGCCACTGGC TGCCGGAGCT GGCCGGCCTG AACAAGCGCG ACATCCATGA CCCGGCCAGC
CTCGGCGGGC TGTTCGCCCC GGCCGGCTAT CCACGGCCGA TCGTCGATCT GTCGCGCTCG
CGCGAACGCG CCCTGGCGGC GTTCAGAAAC CTCGGCCAGG AGGTGCCCGC ATGA
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| Protein sequence | MQQLMWFRSD LRIDDNTALS QAMSRGSTIA LYLVTPGQWQ RHDDAPCKVD FWLRNLAHLS
RALAALNVPL LIRQCEDWNQ APAVIAEVCH QHNVCAVHAN EEYGINENLR DRCVAAYLAQ
QDIAWHSHLD QLLFKPGSIL TRSGGYFQVY SQFRKVCYEH LHMALPGLVA RPVAQAPTPL
ASDAIPHAVD GFAMPSEQLR SLWPAGEEAA RQRLERFADE QIGYYKDERD FPALPGTSQL
SPYLAAGVLS PRQCLHAALA ANRGEFDSGN AGVVTWVNEL LWREFYKHIL VGYPRVSRHR
AFRPETEAVA WRRAPEELAA WQQGRTGLPI IDAAMRQLLE TGWMHNRLRM IVAMFLTKNL
LIDWREGERF FMRHLIDGDL AANNGGWQWS ASTGTDAAPY FRIFNPISQS QKFDSEGRFI
RHWLPELAGL NKRDIHDPAS LGGLFAPAGY PRPIVDLSRS RERALAAFRN LGQEVPA
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