| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1057 |
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| Symbol | lolB |
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| ID | 5107716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1194826 |
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| End bp | 1195440 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640502281 |
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| Product | outer membrane lipoprotein LolB |
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| Protein accession | YP_001186556 |
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| Protein GI | 146306091 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3017] Outer membrane lipoprotein involved in outer membrane biogenesis |
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| TIGRFAM ID | [TIGR00548] outer membrane lipoprotein LolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0342955 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.469069 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTTCGTC ACCTCCTAGT TTTCAGCCTC ATCGCCCTGC TCGCCGGTTG CGCCGGCCTT
ACCTCGCGCG AAGCGCTGGA AGGCCAGGGC AACCCCGCCC AGTGGCAAAT CCACAAACAG
CAGATCAGCC AGCTCGACGG CTGGCAGATC AACGGCAAGA TCGGCATTCG CGCCCCGCAG
GACTCCGGCA GCGCCACCCT GTTCTGGCTG CAGCGTCAGG ACTACTACGA CATTCGCCTC
TCCGGCCCGC TCGGTGGCGG CGCCGCGCGC CTGACCGGCC GCCCCGGCGA CATTCTGCTG
GAAGTGTCCA ACCGCGGCCG CTTCAAGGCC GAATCCCCGG AGGCCCTGCT GCGCGAGCAA
CTGCGCCTCG ACCTGCCGGT GTCCAACCTG CTCTGGTGGA TTCGCGGCCT GCCCGCCCCC
GACAGCCGCA GCCGCCTGAC CCTCGACGCC GACAGCCACC TGGCGCGCCT GGAACAGGAC
GGCTGGCAGG TGGAGTACCA GCGCTATGTC GAACAGAACG GCTACGCCCT GCCCGAGCGC
CTGAAGCTCT ATGGCCAGGA CCTGGAAGTG ACCCTGGTGA TTAAGGACTG GCAGCCGCGT
CAGTTGGGGC AGTAG
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| Protein sequence | MLRHLLVFSL IALLAGCAGL TSREALEGQG NPAQWQIHKQ QISQLDGWQI NGKIGIRAPQ
DSGSATLFWL QRQDYYDIRL SGPLGGGAAR LTGRPGDILL EVSNRGRFKA ESPEALLREQ
LRLDLPVSNL LWWIRGLPAP DSRSRLTLDA DSHLARLEQD GWQVEYQRYV EQNGYALPER
LKLYGQDLEV TLVIKDWQPR QLGQ
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