| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1048 |
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| Symbol | |
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| ID | 5106554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1183089 |
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| End bp | 1186739 |
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| Gene Length | 3651 bp |
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| Protein Length | 1216 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640502270 |
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| Product | signal transduction protein |
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| Protein accession | YP_001186547 |
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| Protein GI | 146306082 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5635] Predicted NTPase (NACHT family) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.958943 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.02885 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCCGA TCTTGAGTGC GATTATTAGC TATTTGACTG GTCTCGCTGT AAACATGAGA
ACCAGTGCGG TAGTCACGAG CAGGGAAAAT GCACTAAAAC AACAAGTGGC TATTTCAGAA
GAAAGGCTAG AGGCTAAGTT AGCAGTTAGG TCGTTAAAAG AAGAAGTACG CTCGACGTGT
ATAAAGCTAG CCCGAAATCT TCATGTCGAG GGAGTGTCTC CAGAAGAGAA GGCGATATGG
AAACTACTTG CGAATGAAAG GTTTCAAGAT GATATAGCAG GTTGGATAGT CACAGGGGGC
ATTGAGGAGG GCGATGATGT TAAGGACCGA TTGCTACGCG CAATGGAGGA GGCTTTAAGT
GACAGTGCAA TAGCTCCTGA GCAAAAGGAG TTTCTGAAGA GTGGGTACTT TGAGTTAATT
GAGAAAACAA TATTCTCGCA TCCTATTCTC GCAAACTGGC GCCACCAATT ATGCTTGGAT
TACCTTAGAG AACAGGTGGC TGAGTTAAGG GTGCGCGCAG AAGAGGCAGC TGGAAAATAT
TCAAAAGAAA AAATTAAAGC TGTTCTGGAT AGCTACTACA ATAAAGCGCT TGAAAGTTGG
GATATTATTG ACTTAAGCAA TCTGCCGGAG GGAGACATTC ACATGGCTAC GCAGCAGCTG
TTGCTACGTC AGCTATACAT GCCCCTACGT ATCTCTGTAG AAGGCGGCGA AGAAGCGCTG
GTTGAACTGG AAGCAAAAAG AGATCTTCAC AGGCGCCAAG AGGCGGGACA TTCTTCTGAA
ACGGAAAATG AAATTAAACA ACCCTTAGCC TCTGTAGGGG AACGACTAGC GCTTGCAAAA
AAATTAGTAG TGCTTGGAGA TCCTGGTGGT GGAAAAACCA CGATGCTTCG CTGGATGGCA
ACAGCGTTTT TGCTCAAACT TAAAGGCGAC GCCGCTTTTG CGGAAATTCC TGATGCAACT
ACGCTACCTG ATCAGAAGCT AATCCCCGTT TTGATTCGTT GCCGGGACTT AGGTAAAGAC
GACCTCTGTA GATGTTTCAA AGATTTTCTG ACTCAACACC TTCACAAAAC CAAGCTTCTG
CCTGAAGAGG CTGACGTTAT GGTCGCAGTA ATACTAGATG GATTAGCAAA GGGGGAGGTT
TTACTGCTAA TTGATGGCCT CGATGAAATA ACAGATTCGC AAGTGCGAAT GATGTTTTGT
CAAGAGCTTG AGCACACCAC TGCACGCTAT CCAGATTCTC CTATAGTCGT CACCTCTAGG
ATAGTAGGTT ATCGCGATAT GCCTTATCGC ATGAGCTCAG GCTTTGAGCA TGGTGTTATA
GCAGAGCTAA AAAAGGAGGA TAAAGATCTG TTTGCACATC GTTGGGTTGA TGTGACAGAG
CAAAATCAGC CTCCTGAGGA GAAAAGTAAG CGAGTAGAGG AATTATTAGA GGCCCTGCAC
TCAAGCAATC GAATAGAGCG ATTGACCGGA AATCCCATGT TGCTTACAAC TCTGGCGCTG
GTTAAGCGAA AAGTTGGAAA GCTACCTAAT AAAAGAACAA AGCTGTATGC AGAAGCAGTT
TCGGTACTAT TGAACTGGAA TCCTAGGCTG TATGAAACTA TTGAGGAGGA CGAAGCAATC
CCTCAGTTGG AATACCTTGC CTACGAGATG TGTAAGCATG GTATCCAGAG GCTTACCGAA
GATGAAGTCA TTGAGCTGTT AGAAAAGCTT CGTGCAGAGT ATCCAAATAT CCGCGCGGTG
CGACGGAGGG ATGCAGAAAG TTTTCTGGCT GCGCTCGAAG CCCGATCAAG CATTCTTATT
AAATCAGGTG GGGTTTGGAA GAAGAGTGAT AGAAATGAAG AGCCTGTCTG GGAGTTTCGT
CACTTAACAT TTCAAGAATA TCTTGCCGCT AAAGCAATTT TAGATGGCCG ATATTCAGAT
AGAAAGCGAT CCCTATCACT TGCAGAACAA GTCGCGCCTT TGGCTGGGGA CATAAAAGCT
GAAGAGGATT CTGCACATAA TGAAGTTAAT GTCTCAGAGT CTTGGCGGGA GGCCTTGAGA
CTGCTCGTGG CAGATTGCAA AGACGATGAC GTAGATGATG TACTTCGTGC CATAGCAGAT
CCTATGGAAC ACGAGGACTC AAATCACACA GCGCGCCCGA GAGCGGTTTT AGCAGCACTA
TGTCTTACAG ACGAGCCTAA CGTTAGTGAG CAGGCAGCGG AATACGTTAT AGATACATTT
ATAAATGTCA TTAAGGCAAA CGATGGAGAA ATGTATCAGA CCACGATGGT AGATGCTGCA
GCATACGAGC TGTCAGGTAG CATGTGGTCC TCGAAACTTA ATTATGCATT AGCTATACGC
TTTTTAAGTT GCCTTCCGGA AGAAAGATTT TATATCGGAG CGCTTCTCGC AACGCTTGAG
GGGCGTAGAA GAGAGTTCTT GTTACTAAGT AGTGCTGAAT ATACTAGAGA GGCAGTAGAG
GCGCTCGGTA GCGATAGCTT GGACGTCATA GTGATTGCCA CTCTTGGTGT AATGCAAGCG
GCATTCCAAG GCTCTTTAGA CAAGCGCAAT GAAGTTGGCG AGTTGTTATA CGGCTTGTTA
GATAAAGGCG ATGCCGTACG TTTTGCTGCC ACATGGGCTC TTGTGTGGGT CACCGGGGCA
TGGGGGGCAG GTAGGGACAT AATTAAGCCG AAAAAACATC ATACAGATAA GCTGGTTGCA
ATATTAAAAG AAACTCCGGC TCAAGAAATT GGTCTTCGTC GTCAAATAAT ATCTATATGT
GCTTTGGCTC CTTCTGATAT AAATTTTGCA GCAATCATGT CTCAAGCAAG TGACAAAGGT
GAGGCAATGG AACTTGCTGT TGTGGCAGCT CTTAGGAAAG TAGGGGGCGC GCGTTCGGTG
TTGCCATTGG TTCAGAAAAC AGAAAGTGAT AGTGCTAGCG TTAGGAAAGC CGCCATTGGT
GCACTTGCTA AAATAGGGGG GCGAAGTGCC ACTGAAGCTC TGATTAGAAA TGTTTCAAAT
GACAGAAGTA CTGTTCGTGT GGCCGCAATA GAGGCATTGG TAGAGTTGGC CGACTTGGAG
GCGGTGCCGG CCATTATCGA GGCGGTAAAA GATCAAGATG CAGACGCAAG AATGGCAGCC
ATAACGGCTT TAGGTCAATT GCAAGATAAA AGAGCTAGCC TTCCTCTTAT AGACTTACTT
GAAGAGGAGT TGCAATATGA AGGGCAGATA TCACAAGGTA CTATTGAACG TTATAAAAAA
CCAGCAATAG CTATTGCTCG GGCTCTAGGT TTTATTGGTG ACAACAGAGC CATTACGGTG
TTAAAGAAAT CACTTGCTAG CTCTTTTGCG CCATTACACA TATCCAGTGC AATTGCTCTA
GCAAACCTCG GAGATCCGGA AGGATTTGAC GCTTCACAAA TTTTGCTAAA ATCCAATGTC
CGTGGACGTA GAGATGCTAC TGTCAGAGAA ATTGCGAACA CTTGCAACGA CAGCATATTG
CGCCGAGTTA TCTCTAAGGA CTTAGATGGT GCCGCCCCTT GGCTACATCC TCAAGAAACT
ATTACCAAAC AGAAAGCAAT AGAGTTTTCC GAGGTTCTTA AAGTGAGCAT TGATAAGATT
GAGGCGGTTT TGGTGAGGCT CAAAAAGTTT GGGTTCTCTA TAGAGCAATA A
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| Protein sequence | MDPILSAIIS YLTGLAVNMR TSAVVTSREN ALKQQVAISE ERLEAKLAVR SLKEEVRSTC
IKLARNLHVE GVSPEEKAIW KLLANERFQD DIAGWIVTGG IEEGDDVKDR LLRAMEEALS
DSAIAPEQKE FLKSGYFELI EKTIFSHPIL ANWRHQLCLD YLREQVAELR VRAEEAAGKY
SKEKIKAVLD SYYNKALESW DIIDLSNLPE GDIHMATQQL LLRQLYMPLR ISVEGGEEAL
VELEAKRDLH RRQEAGHSSE TENEIKQPLA SVGERLALAK KLVVLGDPGG GKTTMLRWMA
TAFLLKLKGD AAFAEIPDAT TLPDQKLIPV LIRCRDLGKD DLCRCFKDFL TQHLHKTKLL
PEEADVMVAV ILDGLAKGEV LLLIDGLDEI TDSQVRMMFC QELEHTTARY PDSPIVVTSR
IVGYRDMPYR MSSGFEHGVI AELKKEDKDL FAHRWVDVTE QNQPPEEKSK RVEELLEALH
SSNRIERLTG NPMLLTTLAL VKRKVGKLPN KRTKLYAEAV SVLLNWNPRL YETIEEDEAI
PQLEYLAYEM CKHGIQRLTE DEVIELLEKL RAEYPNIRAV RRRDAESFLA ALEARSSILI
KSGGVWKKSD RNEEPVWEFR HLTFQEYLAA KAILDGRYSD RKRSLSLAEQ VAPLAGDIKA
EEDSAHNEVN VSESWREALR LLVADCKDDD VDDVLRAIAD PMEHEDSNHT ARPRAVLAAL
CLTDEPNVSE QAAEYVIDTF INVIKANDGE MYQTTMVDAA AYELSGSMWS SKLNYALAIR
FLSCLPEERF YIGALLATLE GRRREFLLLS SAEYTREAVE ALGSDSLDVI VIATLGVMQA
AFQGSLDKRN EVGELLYGLL DKGDAVRFAA TWALVWVTGA WGAGRDIIKP KKHHTDKLVA
ILKETPAQEI GLRRQIISIC ALAPSDINFA AIMSQASDKG EAMELAVVAA LRKVGGARSV
LPLVQKTESD SASVRKAAIG ALAKIGGRSA TEALIRNVSN DRSTVRVAAI EALVELADLE
AVPAIIEAVK DQDADARMAA ITALGQLQDK RASLPLIDLL EEELQYEGQI SQGTIERYKK
PAIAIARALG FIGDNRAITV LKKSLASSFA PLHISSAIAL ANLGDPEGFD ASQILLKSNV
RGRRDATVRE IANTCNDSIL RRVISKDLDG AAPWLHPQET ITKQKAIEFS EVLKVSIDKI
EAVLVRLKKF GFSIEQ
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