Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1045 |
Symbol | |
ID | 5106553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 1180935 |
End bp | 1181354 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640502268 |
Product | PilT domain-containing protein |
Protein accession | YP_001186545 |
Protein GI | 146306080 |
COG category | [R] General function prediction only |
COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0543043 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.324928 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCTGC TTGATACCAA CGTGCTGTCG GAACTCATGC GTGCCAAGCC TGCGCCTCAG GTTCTGGAGT GGGTTGACGC TCAGCCTGTC GGGGATCTGG TAATCACCTC GATCACCGTT GCGGAAATTC TCTATGGCAT TGCCAAGATG CCGGACGGGA AACGCAAGCA GGGACTGCTC GATGTAGCCT CGGTCATGTT CGATGAAGAC TTCGCGGGCA ATATCCTGCC GTTCGATGCA GATGCCGCTG TGCATTACGC AGAGATAGCC GCAGAAACCG AGGCTAAAGG GCAGGTGGTT GATATGGCCG ATGCGCAGAT CGCTGCAATC GGTCGGCTAC ATGATGCCGT GATCGCAACT CGCAATATTC GCCACTTCGA AACGCTAGGC GTTGCCCTGG TAGATCCCTG GAGCAATTAG
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Protein sequence | MILLDTNVLS ELMRAKPAPQ VLEWVDAQPV GDLVITSITV AEILYGIAKM PDGKRKQGLL DVASVMFDED FAGNILPFDA DAAVHYAEIA AETEAKGQVV DMADAQIAAI GRLHDAVIAT RNIRHFETLG VALVDPWSN
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