Gene Pmen_1043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1043 
Symbol 
ID5107703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1179846 
End bp1180316 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content63% 
IMG OID640502265 
Producthypothetical protein 
Protein accessionYP_001186543 
Protein GI146306078 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0355222 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.453598 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCAGG ATGCAGAGGC CGGCAGGGGA TGGCAAGAGC GCCAGTGCTC AAGTCTCGCC 
AAGGATTCCG AGCACGACGA TACTGTCAGC CATTACAGGC CAAGCAAGGA TCGCGCGATG
AAAAAGCTGC TCGTCATGCT GCTGCTCGGT GCAGCCTTCT GGCAGTTCTA CCTGAGCAAA
CCCGGCAGCC CGGTGATCAG CAACATCGCC AACGACGGCT CGGTAATGGG CAACCCGGTG
GTCACCCAGC CAGGCTCGGC TTTCTCGCTC GACAGCCTGC GCCCGTCGTC CTCCATCAGC
CAACCAGCCG CCCAGGTCGC CGGCAACCCA TACCGCTGCG ATGGCCGCAC TCATTGCTCG
CAGATGACCT CCTGCGCCGA AGCCATTTTC TTTCTGCGCC ACTGCCCTGG CACCAGAATG
GACGGTGACA ACGACGGTGT GCCCTGTGAG GGGCAGTGGT GCGGACGTTA G
 
Protein sequence
MAQDAEAGRG WQERQCSSLA KDSEHDDTVS HYRPSKDRAM KKLLVMLLLG AAFWQFYLSK 
PGSPVISNIA NDGSVMGNPV VTQPGSAFSL DSLRPSSSIS QPAAQVAGNP YRCDGRTHCS
QMTSCAEAIF FLRHCPGTRM DGDNDGVPCE GQWCGR