| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1026 |
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| Symbol | |
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| ID | 5108648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1161689 |
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| End bp | 1163224 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640502248 |
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| Product | carbohydrate-binding and sugar hydrolysis |
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| Protein accession | YP_001186526 |
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| Protein GI | 146306061 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.931695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACGTA ACGGCTTAGC TCTTCCCCTG CTCCTCGGCG CCCTGCATCT GCTGGCGCCG
CTGGCCCAGG CCAACCCGCT GGAGCACCAG TTCGACTACC GCGTGCGCAC CGCACCCGCC
GAAGAGCTGC ACCTGGAAAC CCCGGAGCTG CCGGACCTGT CCGGCTACAC CCTGGACGCC
GTGCTGGCCA AGATTCCGCA AGGCGCCAAG GGCCAGGTGG CGGTGCGCCG CATGCTGCGC
CAGGACGCGC TGAAGGACTT CACCGGCGGC AACGAACGCC TGCGCGAGTG GGTCAAGCGC
CAGCAGGGCA TGCCCATGGC GATCTTCATC GAAGGTGGCC TGGTCACCGC TCAGGACCTG
GCTGCGGCCC TGCCCGACAG TCAGTTCGAA GAGCAGGAGC CGGGCGTGTA CATCGCCCGC
CTGCCCATCG TCGTCGCCGA AGGCGCGGCG CTGCATGTGG GCAAGGAAAC CCGCGAGCTG
CGCCTGTCGC AGGAGCGCGG CTCGTTCCTG GTCAACGACG GCCTGATGTT CCTCACCGAG
ACCCGCATCA CCGCCTGGCG CGAGGCCGAC AACGGCCCGG CGACGATGCG CGACAACGGC
AAGGAATTCC GTCCCTTCCT GGTGTCCTGG GGCGGCAGCG AGCTGTACAT CGCCAGCACC
GTGCTGACCA GCCTGGGCTA CGACACCTCC AAGTCCTACG GCGTGTCGAT CACCCAGTAC
ACGCCGAACA TGCACAAACG CCTGCAGCGC GAGGAGCCGA CCGGCTGGCT GATCGACTCG
GAATTCATCG ACCACTGGTA CGGCTTCTAC TGCTACGAAG CGCAGAACGT GGTGATCAAG
GGCAATACCT ACCGCGACAA CATCGTCTAC GGCATCGACC CGCACGACCG CTCGCACGGC
CTGATCATCG CCGAGAACCG CGTCTTCGGG ACCAAGAAGA AGCACGGCAT CATCATCTCG
CGCGAGGTCA ACGACAGCTG GATCATCAAC AACGAGAGCT TCGACAACAA GCTCTCCGGG
GTGGTGATCG ACCGTAACAG CGAACGCAAC CTGATCGCCT ACAACCGCGT GTACGGCAAC
CATTCCGACG GCATCACCCT GTACGAGAGC AGTGACAACC TGCTGTGGGG CAACCAGGTG
CTGGGCAACC AGCGCCACGG CATCCGCATC CGCAACAGCG AGAACATCCG CCTTTACGAA
AACCTTTCGG CGATGAACCA GCTCACCGGC GTGTATGGCC ACATCCGCGA CCTCTCCGAC
ACCGACCGCG ACCTCAAGCT GGACCCGTTC GACACCAAGG TATCGATGAT CATCGTCGGC
GGCACCCTGG CCGGCAACGG CTCCAGCCCG ATCAGCATCG ACTCGCCGCT GTCGGTCGAG
CTGTACCGCG TGAAGATGCT CGCCCCGCGC AAGAGCAGCG GTATCCAGCT CGCCGGCATT
CTCGGCGACA AGCAGGAGCA GATCCTCGAC CTCATGGTGC GCCAGCGCCT GCCCGTGCTG
ATCGACCCGA TCCAGCCCGA GAAACTGACC AATTGA
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| Protein sequence | MQRNGLALPL LLGALHLLAP LAQANPLEHQ FDYRVRTAPA EELHLETPEL PDLSGYTLDA
VLAKIPQGAK GQVAVRRMLR QDALKDFTGG NERLREWVKR QQGMPMAIFI EGGLVTAQDL
AAALPDSQFE EQEPGVYIAR LPIVVAEGAA LHVGKETREL RLSQERGSFL VNDGLMFLTE
TRITAWREAD NGPATMRDNG KEFRPFLVSW GGSELYIAST VLTSLGYDTS KSYGVSITQY
TPNMHKRLQR EEPTGWLIDS EFIDHWYGFY CYEAQNVVIK GNTYRDNIVY GIDPHDRSHG
LIIAENRVFG TKKKHGIIIS REVNDSWIIN NESFDNKLSG VVIDRNSERN LIAYNRVYGN
HSDGITLYES SDNLLWGNQV LGNQRHGIRI RNSENIRLYE NLSAMNQLTG VYGHIRDLSD
TDRDLKLDPF DTKVSMIIVG GTLAGNGSSP ISIDSPLSVE LYRVKMLAPR KSSGIQLAGI
LGDKQEQILD LMVRQRLPVL IDPIQPEKLT N
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