| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1024 |
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| Symbol | algL |
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| ID | 5108646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1159160 |
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| End bp | 1160236 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640502246 |
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| Product | poly(beta-D-mannuronate) lyase |
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| Protein accession | YP_001186524 |
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| Protein GI | 146306059 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAGAC GACTCGCACC CCTGACGCTC CTGGCCGTGC TGCTCAGCGC ACCGGCCTTC
GCCGAGCTGC AGCCGCCGGC GGGCTACCAC GCGCCGGTCG GCCAGCGCGA CGGCAAGGCG
CCCGCCTGTT CGGCGCCGCC GCAGCCCTAT ACCGGCGAAC TGCAGTTCAC CAGCAAGTAC
GCCGGCTCCG ACAGCGCGCG TGCCACGCTC AACCGCAACG CGGAGAAGAA CTTCCGTAAG
CAGACCGAAG GCATCACCCG CCTGGAGAAG GAGGCCGGCC GGCTGATCAC CGGCTACATG
CGCACCGGTC AGCGCGAACG CCTGGAATGC GCCATCGAGT GGCTCGACCA CTGGGCCAGT
GCCGATGCGC TGGAGTCCGA GCAGTACAAC CACACCGGCA AGTCGATGCG CAAATGGGCC
CTCGGCAGCC TGGCCGGCGC CTGGCTGCGC CTGAAGTTCT CCGAGTCGCA GCCGCTGGCC
GACTACCCGC AGCAGAGCGA GCGCATCGAA GCCTGGTTCG TGCGCCTGGC CGAACACACG
GTGCGCGAGT GGAGCGACCT GCCGCTGAAG AAGATCAACA ACCACAGCTA CTGGGCCGCC
TGGTCGGTGA TGGCGGTGGC GGTGATCGGC GATCGCCGCG ACCTGTTCGA CTGGTCCGTC
GGCCAGTTCC GCATCGCCGC CGGACAGGTG GACGACGAAG GCTTTCTCGA CAACGAGATG
CGCCGCCGTC AGCGCGCCCT GGCCTACCAC AACTACGCGC TGCCGCCGCT GGCGATGATC
GCCGCCTTCG CCCAGGCCAA CGGCGTCGAC CTGCGTGGCG AGAACCATGG CGCGCTGCAG
CGCCTGGCCG AGCGGGTGCT GCAGGGGGCG CGCGACCCGG GCGCCTTCGC CCAGCGCACC
GGCTCGCGTC AGGACATGGA AGAACTGCGC AAGAAGTTCA AGTACGCCTG GCTGGCGCCC
TACTGCACGC TCTACGTGTG CAACGAGCAG ACGCGTGAAC TGAACCAGGA GATGGGGCCG
TTCAACAGCT TCCGTCTTGG CGGCGAGGTG ACCCAGGTCT TCGGCGGGGG CGGCTAA
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| Protein sequence | MPRRLAPLTL LAVLLSAPAF AELQPPAGYH APVGQRDGKA PACSAPPQPY TGELQFTSKY
AGSDSARATL NRNAEKNFRK QTEGITRLEK EAGRLITGYM RTGQRERLEC AIEWLDHWAS
ADALESEQYN HTGKSMRKWA LGSLAGAWLR LKFSESQPLA DYPQQSERIE AWFVRLAEHT
VREWSDLPLK KINNHSYWAA WSVMAVAVIG DRRDLFDWSV GQFRIAAGQV DDEGFLDNEM
RRRQRALAYH NYALPPLAMI AAFAQANGVD LRGENHGALQ RLAERVLQGA RDPGAFAQRT
GSRQDMEELR KKFKYAWLAP YCTLYVCNEQ TRELNQEMGP FNSFRLGGEV TQVFGGGG
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