| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1009 |
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| Symbol | |
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| ID | 5108631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1137752 |
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| End bp | 1138768 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640502226 |
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| Product | ketol-acid reductoisomerase |
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| Protein accession | YP_001186509 |
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| Protein GI | 146306044 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0059] Ketol-acid reductoisomerase |
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| TIGRFAM ID | [TIGR00465] ketol-acid reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0031773 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.000000327544 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAGTTT ATTACGACAA AGATTGCGAC CTCTCCATCA TCCAGGGCAA GAAAGTCGCC
ATCATCGGTT ATGGCTCCCA GGGCCATGCC CAGGCCTGCA ACCTGAAGGA TTCCGGCGTC
GATGTCACCA TCGGTCTGCG TAAAGGCTCC GCGACCGTTG CCAAGGCCGA AGCTCATGGC
CTGAAAGTGA CCGACGTGGC CAGCGCCGTT GCCGCGGCCG ATCTGGTCAT GATCCTGACC
CCGGACGAGT TCCAGGGCCA GCTGTACAAG AACGAGATCG AGCCGAACAT CAAGAAGGGC
GCGACTCTGG CCTTCTCCCA CGGCTTCGCC ATCCACTACA ACCAGGTCGT TCCGCGTGCC
GACCTCGACG TGATCATGAT CGCGCCGAAG GCCCCGGGCC ACACCGTGCG TACCGAGTTC
GTCAAGGGCG GCGGCATTCC TGATCTCATC GCCGTTTACC AGGACGCTTC CGGCAACGCC
AAGAACGTCG CCCTGTCCTA CGCCTCGGGC GTTGGTGGCG GTCGTACCGG CATCATCGAA
ACCACCTTCA AGGACGAGAC CGAAACCGAC CTGTTCGGTG AGCAGGCCGT TCTCTGCGGC
GGTACCGTCG AACTGGTCAA GGCCGGTTTC GAAACTCTGG TCGAGGCCGG CTACGCGCCG
GAAATGGCCT ACTTCGAGTG CCTGCACGAA CTGAAGCTGA TCGTTGACCT CATGTACGAA
GGCGGCATCG CCAACATGAA CTATTCGATC TCCAACAACG CCGAGTACGG CGAGTACGTG
ACCGGTCCGG AAGTGATCAA CGCCGAATCC CGTCAGGCCA TGCGCAATGC TCTGAAGCGC
ATCCAGGATG GCGAATACGC CAAGATGTTC ATCAGCGAAG GCGCCACTGG CTACCCGTCG
ATGACCGCCA AGCGTCGCAA CAACGCCGCT CACGGTATCG AAGTCATCGG TGAGCAGCTG
CGTGCGATGA TGCCGTGGAT CGCTGCCAAC AAGATCGTCG ACAAGACCAA GAACTAA
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| Protein sequence | MKVYYDKDCD LSIIQGKKVA IIGYGSQGHA QACNLKDSGV DVTIGLRKGS ATVAKAEAHG
LKVTDVASAV AAADLVMILT PDEFQGQLYK NEIEPNIKKG ATLAFSHGFA IHYNQVVPRA
DLDVIMIAPK APGHTVRTEF VKGGGIPDLI AVYQDASGNA KNVALSYASG VGGGRTGIIE
TTFKDETETD LFGEQAVLCG GTVELVKAGF ETLVEAGYAP EMAYFECLHE LKLIVDLMYE
GGIANMNYSI SNNAEYGEYV TGPEVINAES RQAMRNALKR IQDGEYAKMF ISEGATGYPS
MTAKRRNNAA HGIEVIGEQL RAMMPWIAAN KIVDKTKN
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