| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1006 |
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| Symbol | |
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| ID | 5108628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1134473 |
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| End bp | 1136197 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640502223 |
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| Product | acetolactate synthase 3 catalytic subunit |
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| Protein accession | YP_001186506 |
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| Protein GI | 146306041 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.850126 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000000000038167 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGAGCTCT TATCTGGCGC TGAAATGGTC GTCCGCTTCC TGCGTGACGA AGGCGTTAAG
TACATCTACG GGTACCCGGG TGGTGCCCTC CTGCATATTT ACGATGCCCT GTTCAAAGAA
CCGGAAGTGA CTCACATCCT GGTTCGCCAC GAGCAGGCCG CTACCCATAT GGCTGACGGC
TATGCCCGCG CCACCGGCAA GGCCGGTGTG GTGCTGGTGA CCTCCGGCCC GGGCGCGACC
AATGCCATCA CCGGCATTGC TACCGCCTAC ATGGATTCCA TCCCGATGGT GGTGATCTCC
GGTCAGGTGC CGAGCGCCAT GGTCGGTACC GATGCCTTCC AGGAAACCGA CATGGTCGGT
ATTTCCCGCC CGATCGTGAA GCACAGCTTC ATCATCAAGC ACCCCTCGGA AATCCCCGAA
GTGCTGAAGA AGGCGTTCTA TCTCGCCGAG TCCGGTCGTC CCGGCCCGGT CGTGGTCGAC
ATTCCGAAGG ACATGGGCGA TCCGACCCAG AAGTTCGAAT ACGTCTACCC GAAGAAGGTC
AAGCTGCGCT CCTACAGCCC GGCGGTACGT GGCCACTCCG GCCAGATCCG CAAGGCTGCC
GAGATGCTTC TGGCCGCCAA GCGTCCGGTC ATGTATTCCG GCGGTGGCGT GATCATGGGC
GGGGCTTCCG CGCCGCTGAC CGAACTGGCG CAAATGCTCA ACCTGCCGGT GACCAACACC
CTGATGGGCC TCGGTGGTTA TCCGGGCACC GACCGCCAGT TCATCGGCAT GCTCGGCATG
CACGGCAGCT ACACCGCCAA CCTGGCCATG CACCACGCCG ACGTGATCCT GGCGGTCGGT
GCGCGTTTCG ATGATCGCGT GATCAACGGT GCGGCCAAGT TCTGCCCGAA CGCCAAGATC
ATTCATATCG ACATCGACCC GGCTTCGATC TCCAAGACCA TCAAGGCCGA TATCCCGATC
GTTGGCCCGG TGGACAGCGT GCTGACCGAG ATGGTCGCCA TCCTCAAGGA AATCGGTGAA
ACCCCGAACA AGGACACCGT TGCCAGCTGG TGGAAGCAGA TCGACGAGTG GCGCGCTGGT
GGCCGTCTGT TCCCCTACAA CGAGGGCGAC GGTTCGATCA TCAAGCCGCA GACCGTGATC
GAAACCCTGT GCGAAGTGAC CCGAGGCGAT GCCTACGTCA CCTCCGATGT CGGCCAGCAC
CAGATGTTCG CCGCGCAGTA TTACAAGTTC AACAAGCCCA ATCGCTGGAT CAACTCCGGT
GGCCTGGGCA CCATGGGCTT CGGTTTCCCG GCGGCCATGG GCATCAAGCT GAACTTCCCG
GAGGCCGACG TGGCGTGCGT GACCGGTGAA GGCAGCATCC AGATGAATAT CCAGGAGCTG
TCGACCTGCC TGCAGTACGA CCTGCCGGTA AAGATCGTCA ACCTGAACAA CGGTGCTCTC
GGCATGGTCC GCCAGTGGCA GGACATGCAG TACAACAGCC GTTATTCGCA CTCCTACATG
GAGTCGCTGC CGGACTTCGT CAAACTGGCC GAAGCCTACG GTCACGTCGG CATGCGCATC
ACCGAGCTGA AGGACCTCAA GCACAAACTC GAGGAAGCCT TCGCTCTGAA GAATCGCCTG
GTATTCCTCG ATATCGCGGT GGACTCCAGC GAGCACGTCT ATCCGATGCA GATCAGAGAC
GGCGCGATGC GTGACATGTG GCTGAGCAAG ACGGAGCGGA CCTAA
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| Protein sequence | MELLSGAEMV VRFLRDEGVK YIYGYPGGAL LHIYDALFKE PEVTHILVRH EQAATHMADG
YARATGKAGV VLVTSGPGAT NAITGIATAY MDSIPMVVIS GQVPSAMVGT DAFQETDMVG
ISRPIVKHSF IIKHPSEIPE VLKKAFYLAE SGRPGPVVVD IPKDMGDPTQ KFEYVYPKKV
KLRSYSPAVR GHSGQIRKAA EMLLAAKRPV MYSGGGVIMG GASAPLTELA QMLNLPVTNT
LMGLGGYPGT DRQFIGMLGM HGSYTANLAM HHADVILAVG ARFDDRVING AAKFCPNAKI
IHIDIDPASI SKTIKADIPI VGPVDSVLTE MVAILKEIGE TPNKDTVASW WKQIDEWRAG
GRLFPYNEGD GSIIKPQTVI ETLCEVTRGD AYVTSDVGQH QMFAAQYYKF NKPNRWINSG
GLGTMGFGFP AAMGIKLNFP EADVACVTGE GSIQMNIQEL STCLQYDLPV KIVNLNNGAL
GMVRQWQDMQ YNSRYSHSYM ESLPDFVKLA EAYGHVGMRI TELKDLKHKL EEAFALKNRL
VFLDIAVDSS EHVYPMQIRD GAMRDMWLSK TERT
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