Gene Pmen_1004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1004 
Symbol 
ID5108626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1133296 
End bp1133625 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content63% 
IMG OID640502221 
Producthypothetical protein 
Protein accessionYP_001186504 
Protein GI146306039 
COG category[S] Function unknown 
COG ID[COG3098] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.594 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000000127796 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACGCTC GTGTGGCGCC GCTGGCCGAG CAACTGCTGT TGATCGAGCG GGAATTGCGT 
GTGCTCGGTT GGTGGCAGGA GCAGGCGCCA AGCGCCGAGG CCTTGGCCAG CCAGGAACCG
TTCTGCGTCG ATACCCTGAC GTTCGAGCAA TGGTTGCAAT GGATTTTCCT ACCGCGAATG
AAGCTCCTGC TGGAAACAGG CGCTCAGTTG CCGTCGGTAT CGGGAATTCA GGCGATGGCC
GAGATGGTCT ATCGCGAGCA GCCGGGCCTT GCGCGTCGGC TGCTGGAGCT GCTGGGCGAA
TTCGATCGCT TGCTCACTCG CGCGCCCTAG
 
Protein sequence
MDARVAPLAE QLLLIERELR VLGWWQEQAP SAEALASQEP FCVDTLTFEQ WLQWIFLPRM 
KLLLETGAQL PSVSGIQAMA EMVYREQPGL ARRLLELLGE FDRLLTRAP