Gene Pmen_0996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0996 
Symbol 
ID5108618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1125250 
End bp1126134 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content67% 
IMG OID640502213 
Producthypothetical protein 
Protein accessionYP_001186496 
Protein GI146306031 
COG category[S] Function unknown 
COG ID[COG3016] Uncharacterized iron-regulated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000003663 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.3879200000000002e-18 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCGAGCCT TGCTGCTGAG TTGTCTGGTC CTGCTCGGCG CCTGCCAGAG CCAGAACATG 
TTGCCGCCGC CGGCGCCGCT CGCCCCGCTG GGACGCGAGC ATGTCGATTT CGCTCGCATC
GTCGATCTGG CCAGCGGACA GACGATCAGC CCTGAGCAGT TGCTGGCACG CCTGGCGCCG
GCCGAGCGGG TACTGGTCGG CGAGCAGCAC GACAATCCCG ATCACCATGC CCTGCAGCTC
TGGCTATTGC GCGAGCTGTC GAAGCAGCGC CCACAGGGCA GCGTGCTGAT GGAGATGCTC
AACCCCGATC AGCAGAACAA GATCGACCAG GCGCAGGCAG CTGCCCGTGC GGGACAGACG
ATCAGTGATC CGTTGGCGAC CCTGGCCTGG CAGCCGGGCT GGAGCTGGTC GCTGTATGGG
CCGCTGGTGC TGCATCAACT GCGACAGCCC TATCCGTTGC TCGCGGCTAA TCTGGATCGT
GCCGAGATCA TGCAGATCTA TCGCCAGCGT CCGACGTTGC AGGGTGAGCG CTCCAGTGCC
GTCGAGGTGC AGGAGCGCCT GCTGGAGGAC ATCCGCGCGT CGCATTGCGG CCTGCTGCCG
GACAGTCAGT TGCCGGCGAT GCTCGCCGTG CAGCAGCAGC GCGACCGGCG CATGGCCGAG
GCGCTGCTGG CGGCACCGCA GCCCAGCCTG TTGCTGGCCG GAGCCTTTCA TGCACGCAAG
GATCTCGGCG TCCCCTTGCA TCTGGCCGAT CTGGGAGCTC AAGCGGGTAC TGCGGTGTTG
ATCCTGGCGG AGGTCGGGCG CGAGGTGGAT GCCAGCATGG CCGATTACGT CTGGTTCACG
GCCGCGCAGC CGCAGCAGGA TCACTGCGCC AAACTGCGAC CCTAG
 
Protein sequence
MRALLLSCLV LLGACQSQNM LPPPAPLAPL GREHVDFARI VDLASGQTIS PEQLLARLAP 
AERVLVGEQH DNPDHHALQL WLLRELSKQR PQGSVLMEML NPDQQNKIDQ AQAAARAGQT
ISDPLATLAW QPGWSWSLYG PLVLHQLRQP YPLLAANLDR AEIMQIYRQR PTLQGERSSA
VEVQERLLED IRASHCGLLP DSQLPAMLAV QQQRDRRMAE ALLAAPQPSL LLAGAFHARK
DLGVPLHLAD LGAQAGTAVL ILAEVGREVD ASMADYVWFT AAQPQQDHCA KLRP