| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0995 |
|---|
| Symbol | hmuV |
|---|
| ID | 5108617 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 1124467 |
|---|
| End bp | 1125234 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640502212 |
|---|
| Product | hemin importer ATP-binding subunit |
|---|
| Protein accession | YP_001186495 |
|---|
| Protein GI | 146306030 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4559] ABC-type hemin transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.000453335 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.0000000000000146988 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCAGG TCGAACAGCT GGAAATCCGC CGCGGCCAGT GCGTGGTGCT CAGTGGCATC
GATCTGCAGT TGCGTCCTGG CGAGGTGCTG GGTGTGCTGG GGCCCAATGG CGCGGGCAAG
AGCACGCTGC TGGCAGCGAT GACTGGCGAG CTGCCAGCCA GCGCCGGCCG GGTGACCCTT
GATCAGCGGG CGCTCGCTGA CTGGTCGGGG CCGCTGCGGG CCAGACGCCT GGCCGTTCTG
CCGCAGAGCT CGAGCCTGAA TTTCGCCTTT CGCGTCGAGG AGGTGGTCGC CATGGGCCGG
CTGCCCCACG ACAGCGGTCG CGTGCGCGAT ACGCAGATCG TTCAGGAGGC GCTGCATGCC
GCCGATGCTG CGCATCTGGC CGGGCGCAGC TACCTGGCGT TGTCCGGCGG CGAGCGTCAG
CGTGTGCATC TGGCGCGGGT GCTGGCGCAG CTGTGGCCGG GCGGCGAGGG GCAGATCCTG
TTGCTCGATG AGCCGACCTC GATGCTCGAT CCGCTGCATC AGCACACCTG CCTGCAGGCA
GTTCGTCGCC TGGCCGAATC CGGCGTGGCG GTACTGGTGA TTCTTCACGA CCTCAATCTT
GCCGCCCGTT ACTGCGACCG TCTGCTGTTG CTGGAGCGGG GCAGGGCGCA CGCTCTGGGC
ACGCCGGCCG AGGTCTTGCG CGCCGAACCC CTGCAGGCCG TGTTCGGTCT GGAAGTCCTG
GTGCAGACTC ATCCCGAACG CGGCCACCCG CTGATTGTCG CCCGCTGA
|
|---|
| Protein sequence | MLQVEQLEIR RGQCVVLSGI DLQLRPGEVL GVLGPNGAGK STLLAAMTGE LPASAGRVTL
DQRALADWSG PLRARRLAVL PQSSSLNFAF RVEEVVAMGR LPHDSGRVRD TQIVQEALHA
ADAAHLAGRS YLALSGGERQ RVHLARVLAQ LWPGGEGQIL LLDEPTSMLD PLHQHTCLQA
VRRLAESGVA VLVILHDLNL AARYCDRLLL LERGRAHALG TPAEVLRAEP LQAVFGLEVL
VQTHPERGHP LIVAR
|
|---|
| |