| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0993 |
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| Symbol | |
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| ID | 5108615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1122531 |
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| End bp | 1123430 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640502210 |
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| Product | periplasmic binding protein |
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| Protein accession | YP_001186493 |
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| Protein GI | 146306028 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4558] ABC-type hemin transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00265339 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0000000000789145 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGTCTTT CCAACATCCT GGGCGGTCTG GCGGCCGTCC TGCTGTTTCC CTGCCAGGTA
CTGGCGGATG AGCCGTTGCC ACAGCGCTGG GTGAGTTCCG GTGGTGCGTT GAGCGAATGG
GTAGTGGCGC TCGGCGGCGA GAGCAGACTG GTGGGCGTCG ATACCACCAG CCGTCATCCG
AGCTCACTGA CCCGGCTGCC CAGCATCGGT TACCAGCGGC AGCTGGCTGC AGAGGGCATT
CTTGCCCTGC GCCCGGATCT GCTGCTCGGC AGCGAGGAAA TGGGGCCGCC GCCCGTCCTC
CAGCAACTGG CCGCCGCCGG TGTGCGCATC GAGCGTCTGA CGGCGCGGGC CGAGCTGGAA
AGCCTGCAGG CCAATCTGCA GCGACTGGGG CAACTGCTCG GCGATGAGGC GGCCGCGCAG
CGCGCGTTTG CCGATTACCA GAAGCGCCTG CAGGCCCAGC AGCAGTGGGT CGAACAGGCG
CAACGCGACC AGCCGGCCCC GGGCGTGCTG CTGTTGCTCG GACATGCCGG CGGCAGCCCG
CTGGTTGGCG GTGTCGATAC GGCTGCCGAT TGGCTGATCA CCCGTGCCGG TGGGCGAAAT
CTGGCCAGCC ACGGCGGCTA CAAGGCGCTT TCCAGCGAGG CGCTGCTGGC GCTTGATCCG
CAGGTCGTGG TGGTGGCTGA CCGCGCCCTG GAAGGCGAAG CTGCCAGGCA GGCCCTGCTG
CAGCAGAACC CCGCCCTGGC CGGTACCCGC GCGGCGCGCG AGGGGCGATT GCTGGCGCTG
GACCCGACTC TGCTGGTCGG CGGGCTCGGG CCGCGTGTGC CTGATGGGCT GGCGATGCTG
GCCGCAGGCT TTTATCCTGC CAGCCAATCC CTGACTGCCG AAGCCAAGCG CGAGCCATGA
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| Protein sequence | MRLSNILGGL AAVLLFPCQV LADEPLPQRW VSSGGALSEW VVALGGESRL VGVDTTSRHP
SSLTRLPSIG YQRQLAAEGI LALRPDLLLG SEEMGPPPVL QQLAAAGVRI ERLTARAELE
SLQANLQRLG QLLGDEAAAQ RAFADYQKRL QAQQQWVEQA QRDQPAPGVL LLLGHAGGSP
LVGGVDTAAD WLITRAGGRN LASHGGYKAL SSEALLALDP QVVVVADRAL EGEAARQALL
QQNPALAGTR AAREGRLLAL DPTLLVGGLG PRVPDGLAML AAGFYPASQS LTAEAKREP
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