| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0988 |
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| Symbol | |
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| ID | 5108610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1117303 |
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| End bp | 1118544 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640502205 |
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| Product | saccharopine dehydrogenase |
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| Protein accession | YP_001186488 |
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| Protein GI | 146306023 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1748] Saccharopine dehydrogenase and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00000577497 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGAAGAAGA ATGTTCTGAT CATTGGTGCA GGAGGTGTTG CCAAGGTGGT GGCCCATAAG
TGCGCGCAAC ACAATGACGA GTTAGGTCGC ATTGCAATTG CGTCGCGCAA CATCTCCAAA
TGCCAGGCCA TCATCGACAG CGTGCAGGCC AAGGGCGGCC TCAAGCAGCC CGGCGAGATC
AAGGCCTATG CGCTGAACGC CCTGGACGTG GAAGCGACCA AGGCACTGAT CCGCGAAACT
GAATCGCAGA TCGTCATCAA CGTCGGCTCG GCGTTCCTCA ACATGTCCGT GCTGCGCGCC
TGTATCGATA CCGGCGTCGC CTATCTGGAC ACCGCCATCC ACGAAGATCC GAGCAAGATC
TGTGAAACCC CGCCGTGGTA CGGCAACTAC GAGTGGAAGC ACCTGGCCGA ATGCCAGGAA
AAGGGCGTGA CCGCCATCCT CGGCGTGGGT TTCGACCCGG GCGTGGTCAA CTCCTATGCC
GCTCTGGCGC AACAACAGTA CTTCGACAAG ATCGAGTCGA TCGACATCCT CGACGTCAAC
GCCGGTTCGC ACGGCAAGTA CTTCGCCACC AATTTCGACC CGGAAATCAA TTTCCGCGAA
TTCACCGGCA CGGTCTACAG CTGGCAGAAC AGCCAGTGGG TGAGCAACCG CATGTTCGAA
GTCAAACGCA CCGACGATCT GCCGGTGGTG GGCGAACAGA ACCTGTACCT GACCGGCCAT
GACGAGGTGC ACTCGCTGTC CAAGCACCTC GACGTACCGA ACGTCCGCTT CTGGATGAGC
TTCGGCGACC ACTACATCAA CGTGTTCACC GTGCTGAAGA ACCTCGGCCT GCTCTCCGAG
CAGCCGGTCA AGACCGCTGA AGGTCTCGAA GTGGTACCGC TGAAAGTGGT CAAGGCCGTG
CTGCCGGATC CCGCCTCGCT GGCGCCGGGC TACACCGGCA AGACCTGCAT CGGCGACCTG
GTCAAGGGCA CCAAGGATGG CCAGCCGCGC GAGCTGTTTA TCTACAACGT CGCCGACCAC
GAAGAAGCCT TCGCCGAGAC CGACAGCCAG GGCATTTCCT ACACCGCCGG CGTGCCGCCG
GTCGCCGCGG CGCTGCTGGT GGCGCGTGGC GAGTGGGATG CCAAACGCAT GGTCAACGTC
GAAGAGCTGC CGGCCGAGCC GTTCCTCAAG CTCCTCGATG TGATGGGCCT GCCCACCCGC
ATCAAGGACG AGCACGGCGA CCGTCCCTGG GATCAGCTCT GA
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| Protein sequence | MKKNVLIIGA GGVAKVVAHK CAQHNDELGR IAIASRNISK CQAIIDSVQA KGGLKQPGEI
KAYALNALDV EATKALIRET ESQIVINVGS AFLNMSVLRA CIDTGVAYLD TAIHEDPSKI
CETPPWYGNY EWKHLAECQE KGVTAILGVG FDPGVVNSYA ALAQQQYFDK IESIDILDVN
AGSHGKYFAT NFDPEINFRE FTGTVYSWQN SQWVSNRMFE VKRTDDLPVV GEQNLYLTGH
DEVHSLSKHL DVPNVRFWMS FGDHYINVFT VLKNLGLLSE QPVKTAEGLE VVPLKVVKAV
LPDPASLAPG YTGKTCIGDL VKGTKDGQPR ELFIYNVADH EEAFAETDSQ GISYTAGVPP
VAAALLVARG EWDAKRMVNV EELPAEPFLK LLDVMGLPTR IKDEHGDRPW DQL
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