Gene Pmen_0976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0976 
Symbol 
ID5108598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1100913 
End bp1101653 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content65% 
IMG OID640502193 
Productputative sulfate transport protein CysZ 
Protein accessionYP_001186476 
Protein GI146306011 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2981] Uncharacterized protein involved in cysteine biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.828685 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.13166 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCCG CCCCCGTCCT GTCCGGCCCG CAATACCTGC GTGAAGGCCT GAAACTGGTA 
CTCAGCCCAG GCTTGCGCCT GTTCGTGCTG CTGCCGCTGG CGGTCAACCT GATCCTCTTC
GCCACGCTGA TCGGTTTCGC CGTGCAGCAG TTCGGCGGTT GGGTCGATAC CTTCATGCCC
AGCCTGCCGA GCTGGCTGAG CTTTCTGCAG TACATACTCT GGCCACTGTT CGTGGTGCTG
GTGCTGCTGA TGGTGTTCTT CACCTTCACT CTGCTGGCCA ACATCATCGC CGCGCCGTTC
AACGGTTTTC TCGCCGAGAA GGTGGAGGTG GTGGTGCGCG GCGAGGACAA CTTTCCCGCC
TTCAGCTGGG CCGAGCTGAT GGCCATGGTG CCGCGCACAC TTGGTCGCGA ATTGCGCAAG
CTGGCCTACT TCCTGCCCCG GGCACTGGCC CTGCTGATCC TCAGCTTCAT TCCGGTGGTG
AACCTGATCG CCGCGCCGCT GTGGTTGCTG TTCGGCGTGT GGATGATGGC GGTGCAGTAC
ATCGACTACC CGGCCGACAA CCACAAGATG AGCTGGCAGG ACATGCTCGC CTGGCTGCGC
GAGAAGCGCT GGCAGAGCCT GAGTTTCGGC GGCATCACCT ACGCCGCCCT GCTGGTGCCG
GGGCTGAACA TCCTGATGAT GCCGGCCGCG GTGGCCGGTG CGACCCTGTT CTGGGTGCGC
GAGCGCGGCG CGCAGGGCTA G
 
Protein sequence
MPAAPVLSGP QYLREGLKLV LSPGLRLFVL LPLAVNLILF ATLIGFAVQQ FGGWVDTFMP 
SLPSWLSFLQ YILWPLFVVL VLLMVFFTFT LLANIIAAPF NGFLAEKVEV VVRGEDNFPA
FSWAELMAMV PRTLGRELRK LAYFLPRALA LLILSFIPVV NLIAAPLWLL FGVWMMAVQY
IDYPADNHKM SWQDMLAWLR EKRWQSLSFG GITYAALLVP GLNILMMPAA VAGATLFWVR
ERGAQG