Gene Pmen_0975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0975 
Symbol 
ID5108597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1099807 
End bp1100916 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content65% 
IMG OID640502192 
Producthypothetical protein 
Protein accessionYP_001186475 
Protein GI146306010 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.727204 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.153799 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTACA ACAACGACAA TGCCCAGGCT TTTCGCCGCG ATTACCGCGC CGCCATCCAC 
CCGCTGTACA ACCCCTGGCT GCATGCAGCC TTCGTCCTGA CCTACGGTCT GCTGTGCATC
GGCTTCCTGT GGCGTACGCT GGATGCGGTT GCCGCCTGGC AATGGCTGCT GGTGCCGGCC
ACGCTGGTGT TCTTCAGCTG GGGCGAGTAT CAGGTGCACA AGCGTCTTGG CCACAACAAG
ACGCGCTTCG GCAGACTCTT CTACAAGCGC CATACGGGCG ATCATCACAG CTTCTTCGTC
GAGACGCTGA TGCCGTACGA GACTCCGCGC GACTGGCGCG TGATCCTGTT TCCAGCCTGG
CTGATCGTGC TGTTCAGCCT GCCGACCTTC GCCGCCTGGT GGCTCCTGTC TCACCTCGAT
GGCAACCTCG CCGCGCTGTT CGCCGGCAGC ATGCTGCTGG GCTACATGAG CTACGAACTG
GTGCATGCCT GCGAGCATCT GCCGGCCGAG CACCCGGTTT CGCGCTTGCC ATGGATTCGC
CAGATGCGCC GCCTGCATGC GCTGCACCAC CGCCGCGAGC TGATGGATTC GCGCAACTTC
GGCATCGTCC ATCCGCTGAT GGACTGGCTG TACGGCACCC TGTACTGGGA GCCGCAGGCG
ATCGTCCAGC AGAACCGCCA GCAGCACCGC ATCCTTGTCG CGCGCTCTGC CGAGCAGGTG
CTGGCCTACG CCGCCGCGCC ATCTCATTGG CCCGAGTGGC ACCCGTCATC GCTGCGCATC
TACGGGCGCG AAGGCGCCTT GCTCGCCGGC GAGCGCTTCG AGGAAGACAT TCACGCCGGC
GGCCGCGCCG GGCATCTGCG CTGGGAAGTG CTCGAGCATC AGCCGGCCCG CCGCTGGCAG
GCCAGTGCAC GGGGCGATCA TGGCCTGCAG TTGCTGCTGA CCTACGAGTG CCTGGAGGTC
GAGGGTGGCT GCGAGTTCGT GCGTACCCTC GAGTACGGTT TCGACAGCTG GCTGATGCGG
CTGGCCAACC TGCTGCTGAT GCGCAGGCGC ATCGAAGGCG AGTCGCAGGC CTCGCTGCGC
GCGCTGCAGC AGGTACTGAT GCGCGGCTAG
 
Protein sequence
MAYNNDNAQA FRRDYRAAIH PLYNPWLHAA FVLTYGLLCI GFLWRTLDAV AAWQWLLVPA 
TLVFFSWGEY QVHKRLGHNK TRFGRLFYKR HTGDHHSFFV ETLMPYETPR DWRVILFPAW
LIVLFSLPTF AAWWLLSHLD GNLAALFAGS MLLGYMSYEL VHACEHLPAE HPVSRLPWIR
QMRRLHALHH RRELMDSRNF GIVHPLMDWL YGTLYWEPQA IVQQNRQQHR ILVARSAEQV
LAYAAAPSHW PEWHPSSLRI YGREGALLAG ERFEEDIHAG GRAGHLRWEV LEHQPARRWQ
ASARGDHGLQ LLLTYECLEV EGGCEFVRTL EYGFDSWLMR LANLLLMRRR IEGESQASLR
ALQQVLMRG