Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0970 |
Symbol | |
ID | 5108592 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 1095340 |
End bp | 1096071 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640502187 |
Product | hypothetical protein |
Protein accession | YP_001186470 |
Protein GI | 146306005 |
COG category | [S] Function unknown |
COG ID | [COG1496] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00726] uncharacterized protein, YfiH family |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.33357 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGTGC ATGACTGGCT GACGCCCGAC TGGCCCGCGC CGGCCAACGT GCGTGCCTGC GTCACCACCC GCAGTGGCGG TGTCAGCGCG GCGCCGTTCG AGACCTTCAA CCTCGGCGAT CACGTCGATG ACGATCCAGC AGCCGTAGCG GCCAACCGCG CGCAGCTGGT CGAGGCCCTC GGTTGCCTGC CGGCCTGGCT GCGCCAGGTG CATGGCGTCG TGGTGGCCGA GGCTGACCCG GCTGTGGTCA TCGAGGCCGA TGGCAACTGG ACGGCCACAC CCGGCATCGC CTGCACGGCG ATGACCGCCG ACTGCCTGCC AGCATTGTTC TGCGACCGCG CCGGCACCCG CGTGGCGGCA GCCCATGCCG GCTGGCGCGG GTTGGCCGGT GGCGTGCTGG AGGCGACCGT GAAGACGCTG GACGTGGCGC CACAGGAGCT GCTGGTGTGG CTCGGCCCGG CCATCGGCCC GGCCGCCTTC GAAGTGGGTA GCGAGGTGCG CGAAGCCTTC GTGCACCAGC ATGCCGAGGC GGCCGGCGCC TTCTTGCCCG GCGCCAAGGC CGACAAGTTC ATGGCCGATA TCTACCAGCT GGCGCGCATT CGTCTGGCTG CCATCGGCGT GACTGCGGTC AGCGGTGGCG GGTTCTGTAC CTACAGCGAT CCGCGTTTCT ACTCCTATCG CCGCAGCCCG CGTACCGGGC GCTTCGCCTC GCTGGTCTGG CTGCAGGGCT GA
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Protein sequence | MSVHDWLTPD WPAPANVRAC VTTRSGGVSA APFETFNLGD HVDDDPAAVA ANRAQLVEAL GCLPAWLRQV HGVVVAEADP AVVIEADGNW TATPGIACTA MTADCLPALF CDRAGTRVAA AHAGWRGLAG GVLEATVKTL DVAPQELLVW LGPAIGPAAF EVGSEVREAF VHQHAEAAGA FLPGAKADKF MADIYQLARI RLAAIGVTAV SGGGFCTYSD PRFYSYRRSP RTGRFASLVW LQG
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