Gene Pmen_0970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0970 
Symbol 
ID5108592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1095340 
End bp1096071 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content70% 
IMG OID640502187 
Producthypothetical protein 
Protein accessionYP_001186470 
Protein GI146306005 
COG category[S] Function unknown 
COG ID[COG1496] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00726] uncharacterized protein, YfiH family 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.33357 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGTGC ATGACTGGCT GACGCCCGAC TGGCCCGCGC CGGCCAACGT GCGTGCCTGC 
GTCACCACCC GCAGTGGCGG TGTCAGCGCG GCGCCGTTCG AGACCTTCAA CCTCGGCGAT
CACGTCGATG ACGATCCAGC AGCCGTAGCG GCCAACCGCG CGCAGCTGGT CGAGGCCCTC
GGTTGCCTGC CGGCCTGGCT GCGCCAGGTG CATGGCGTCG TGGTGGCCGA GGCTGACCCG
GCTGTGGTCA TCGAGGCCGA TGGCAACTGG ACGGCCACAC CCGGCATCGC CTGCACGGCG
ATGACCGCCG ACTGCCTGCC AGCATTGTTC TGCGACCGCG CCGGCACCCG CGTGGCGGCA
GCCCATGCCG GCTGGCGCGG GTTGGCCGGT GGCGTGCTGG AGGCGACCGT GAAGACGCTG
GACGTGGCGC CACAGGAGCT GCTGGTGTGG CTCGGCCCGG CCATCGGCCC GGCCGCCTTC
GAAGTGGGTA GCGAGGTGCG CGAAGCCTTC GTGCACCAGC ATGCCGAGGC GGCCGGCGCC
TTCTTGCCCG GCGCCAAGGC CGACAAGTTC ATGGCCGATA TCTACCAGCT GGCGCGCATT
CGTCTGGCTG CCATCGGCGT GACTGCGGTC AGCGGTGGCG GGTTCTGTAC CTACAGCGAT
CCGCGTTTCT ACTCCTATCG CCGCAGCCCG CGTACCGGGC GCTTCGCCTC GCTGGTCTGG
CTGCAGGGCT GA
 
Protein sequence
MSVHDWLTPD WPAPANVRAC VTTRSGGVSA APFETFNLGD HVDDDPAAVA ANRAQLVEAL 
GCLPAWLRQV HGVVVAEADP AVVIEADGNW TATPGIACTA MTADCLPALF CDRAGTRVAA
AHAGWRGLAG GVLEATVKTL DVAPQELLVW LGPAIGPAAF EVGSEVREAF VHQHAEAAGA
FLPGAKADKF MADIYQLARI RLAAIGVTAV SGGGFCTYSD PRFYSYRRSP RTGRFASLVW
LQG