| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0966 |
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| Symbol | |
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| ID | 5108588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1090999 |
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| End bp | 1092591 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640502183 |
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| Product | sensor protein PilS |
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| Protein accession | YP_001186466 |
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| Protein GI | 146306001 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.253807 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.772393 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCGCTG ACGCCAGCAC CCTCGGCAGC ACGCCAGGCC GACGCATCCT CAGGCTCTAT
CACTTCTATC GCCTGAGCAT CGGTCTGGCG CTGATCCTGC TGATCTCCAG CAATCTCGAC
GAGCAGTTGC TCGATGTCGT GCATATCGAC CTGTTCCGCA GCGGCAGCTG GGCCTACCTG
ATCCTGAACA TCTTCATCGC CGTGCTGGTG CAGAAACCCA AGCATCTGAT GCAGCTGTTC
AGCCTGGCGC TGGTGGATGT GATCTTTCTC TCCGCGCTGT TCTACGCGGC AGGAGGCACT
CCCAGCGGCA TCGGCAACCT GCTGGTGGTG GCCGTGGCCA TTGCCAACAT CCTGCTGCGC
GGCCGTATCG GCCTGTTGAT CGCCGCCATT GCCGCGATGG CGCTGATCTA TCTGACCTTC
TATCTCAGCC TCAGCCGCCC CGCCGCTGCC GCCCAATACG TTCAGGCGGG TGCGCTGGGT
GCGCTGTGCT TCGCCGGCGC ACTATTCATT CAGGGCATCA CTCGCCGCCT GCAGGTCAGC
GAAAGCCTCG CCGAACAGCG CGCCGCCGAT GTGGCCAATC TGGAAGAGCT CAATGCCCAG
ATCCTGCAGC GCATGCGTAC CGGCATCCTG GTGCTGGACA CCCAGCACCG CGTGCTACTG
GCCAACCAGG GCGCCACCCA GTTGCTGGGG CGCGGCGAGC TGGCCGGCAA GATCATCGAC
CCGCACTGCC CGGAACTGGT CAAACGCCTG CAGCAGTGGC TGCACAACCC CACCCTGCGC
CCCGACAGCC TGCAGGCTCA GGTGGACGGC CCGGTGCTGC AGCCCAGCTT CATTTCCCTG
CAACGCGGCG ACGAGCAGCA CACCCTGGTG TTTCTCGACG ATATCTCGCA GATCGCCCAA
CAGGCTCAGC AGCTCAAGCT CGCCTCGCTC GGCCGACTGA CCGCCGGCAT CGCCCACGAG
ATCCGCAACC CGCTGGGCGC CATCAGCCAC GCCGCCCAGC TGCTGCAGGA GTCGGAGGAT
CTGCAGGGGC CGGACCAGCG TCTGGCGCAG ATCATCCAGG ATCACTCCAA ACGCATGAAT
CTGGTGATCG AGAACGTGCT GCAACTGTCG CGCAGACGCC AGGCCGAACC GCAGTTGCTC
GACCTGAAAT ACTGGCTGCA CCGCTTCGCC AGCGAGTTTC GCAGCTCCGC ACCGGCTGAT
CGGCAGATCC ATCTGGAGAC CCAGGGCGGC AGCCTGCAGA CACGAATGGA CCCACACCAG
CTGACCCAGG TGCTGACCAA TCTGGTGCAG AACGGCCTGC GCTATAGTGC CAAGCAGCAC
AGGATCGGCC AGGTCTGGCT ACGCCTGTTC CGGGACCCAA GCAGCGACCT GCCGGTGCTG
GAAATCCTCG ACGACGGCCC AGGCGTGCCG CCCGAGCAGG AGCAGCACAT CTTCGAGCCC
TTCTACACCA CCGAGAACAA GGGCACCGGC CTCGGCCTGT ATATTTCCCG CGAGCTGTGC
CAGGGCAACC AGGCGCGTCT CGACTACAAA CCACGCGAAG GGGGCGGCAG CTGCTTCCGC
ATCACCTTCG CCCATCCGCG CAAACTGAGC TGA
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| Protein sequence | MIADASTLGS TPGRRILRLY HFYRLSIGLA LILLISSNLD EQLLDVVHID LFRSGSWAYL
ILNIFIAVLV QKPKHLMQLF SLALVDVIFL SALFYAAGGT PSGIGNLLVV AVAIANILLR
GRIGLLIAAI AAMALIYLTF YLSLSRPAAA AQYVQAGALG ALCFAGALFI QGITRRLQVS
ESLAEQRAAD VANLEELNAQ ILQRMRTGIL VLDTQHRVLL ANQGATQLLG RGELAGKIID
PHCPELVKRL QQWLHNPTLR PDSLQAQVDG PVLQPSFISL QRGDEQHTLV FLDDISQIAQ
QAQQLKLASL GRLTAGIAHE IRNPLGAISH AAQLLQESED LQGPDQRLAQ IIQDHSKRMN
LVIENVLQLS RRRQAEPQLL DLKYWLHRFA SEFRSSAPAD RQIHLETQGG SLQTRMDPHQ
LTQVLTNLVQ NGLRYSAKQH RIGQVWLRLF RDPSSDLPVL EILDDGPGVP PEQEQHIFEP
FYTTENKGTG LGLYISRELC QGNQARLDYK PREGGGSCFR ITFAHPRKLS
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