| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0956 |
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| Symbol | ispH |
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| ID | 5108814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1080023 |
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| End bp | 1080967 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640502173 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_001186456 |
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| Protein GI | 146305991 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.43046 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATATCA AACTCGCCAA TCCCCGTGGC TTCTGCGCCG GCGTCGATCG CGCCATCGAA
ATCGTCAACC GCGCGCTGGA AGTGTTCGGC CCGCCGATCT ACGTGCGCCA TGAAGTGGTG
CACAACAAGT TTGTGGTCGA GGACCTGCGC GCCCGCGGCG CGGTATTCGT CGAAGAGCTG
GATCAGGTGC CGGACGACGT CATCGTCATC TTCAGTGCTC ATGGCGTGTC CAAGGCCGTG
CGCGACGAGG CGGCCCGGCG CGGCCTCAAG GTATTCGACG CCACTTGCCC GCTGGTGACC
AAGGTGCATA TGGAAGTGGT GCGCTACAGC CGTGAGGGCC GTGAGTGCAT CCTGATCGGC
CACGAAGGCC ACCCGGAAGT CGAAGGCACC ATGGGCCAGT ACGACGCCAG CAATGGCGGC
GCCATCTACT TGGTGGAAGA CGAGGCAGAC GTCGCCGAGC TGCAGGTGCG TAACCCCGAT
AATTTGGCGT TCGTGACCCA GACCACCCTG TCCATGGACG ACACCAGCAA GGTGATCGAC
GCCCTGCGCA GCAAGTTCCC GGCCATCGGC GGCCCGCGCA AGGACGACAT CTGCTACGCC
ACACAGAACC GCCAGGATGC GGTCAAGCAA CTGGCCAGCG AGTGCGACGT GCTGCTGGTA
GTCGGCAGCC CGAATAGCTC CAACTCCAAC CGCCTGCGCG AACTGGCCGA GCGCATGGGT
ACCCCGGCTT ATCTGATCGA CGGCGCCGAA GATCTCAAGC ACGAGTGGTT CGAAGGTGTG
AAGGGTATCG GCATCACTGC GGGGGCGTCT GCACCTGAGG TGCTGGTACG TGGGGTGGTA
GAGCAGTTGC GCGCGTGGGG AGCGGCGGGG GAGACCGAGC TGGATGGACG GCCGGAGAAC
ATTACGTTTT CGATGCCGAA GGAGTTGCGG GTCAAGGCGC TCTGA
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| Protein sequence | MHIKLANPRG FCAGVDRAIE IVNRALEVFG PPIYVRHEVV HNKFVVEDLR ARGAVFVEEL
DQVPDDVIVI FSAHGVSKAV RDEAARRGLK VFDATCPLVT KVHMEVVRYS REGRECILIG
HEGHPEVEGT MGQYDASNGG AIYLVEDEAD VAELQVRNPD NLAFVTQTTL SMDDTSKVID
ALRSKFPAIG GPRKDDICYA TQNRQDAVKQ LASECDVLLV VGSPNSSNSN RLRELAERMG
TPAYLIDGAE DLKHEWFEGV KGIGITAGAS APEVLVRGVV EQLRAWGAAG ETELDGRPEN
ITFSMPKELR VKAL
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