| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0954 |
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| Symbol | lspA |
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| ID | 5108812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1078941 |
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| End bp | 1079450 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640502171 |
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| Product | lipoprotein signal peptidase |
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| Protein accession | YP_001186454 |
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| Protein GI | 146305989 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0597] Lipoprotein signal peptidase |
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| TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.30324 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGAGT CCTCGCGTTT CGGGCATCTG CCCTGGCTGC TGCTGAGTGT GCTGATCCTG
GTCGCCGACC GGGTGACCAA GGACATCTTC GAGGGCACGC TGAGCATGTA TCAGCGTATC
GAAGTGATTC CGGGCTACTT CGACTGGACC CTGGCCTACA ACACCGGCGC AGCATTCAGC
TTCCTGGCCG ATGCCGCCGG CTGGCAGCGC TGGTTCTTCG CCGCCATCGC AATCGTCGTC
AGCGTCGTGC TGGTGGTCTG GCTCAAGCGC CTCAAGCGTC ACGAGACTCT GCTGGCCGTG
GCGCTGGCCA TGGTCCTGGG CGGCGCACTG GGCAATCTGT ATGACCGCGT GGTGCTTGGT
CACGTGGTCG ACTTCATCCT GGTGCACTGG CAGAGCCGCT GGTTCTTCCC GGCGTTCAAC
CTGGCCGACA CCTTCATCAC CATCGGCGCC ATCCTGCTGG CGCTGGATAT GTTCAAGAGC
GACAAGTCCG CGAAGGAGGC TGCGCAATGA
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| Protein sequence | MPESSRFGHL PWLLLSVLIL VADRVTKDIF EGTLSMYQRI EVIPGYFDWT LAYNTGAAFS
FLADAAGWQR WFFAAIAIVV SVVLVVWLKR LKRHETLLAV ALAMVLGGAL GNLYDRVVLG
HVVDFILVHW QSRWFFPAFN LADTFITIGA ILLALDMFKS DKSAKEAAQ
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