Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0951 |
Symbol | |
ID | 5108809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 1073484 |
End bp | 1075025 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640502168 |
Product | integral membrane protein MviN |
Protein accession | YP_001186451 |
Protein GI | 146305986 |
COG category | [R] General function prediction only |
COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.979751 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.521611 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCTGC TCAAATCCCT GGCTGCCGTC AGCTCCCTGA CCATGGTGTC GCGTGTGCTG GGGTTTGTGC GCGACACCAT CATCGCCCGC ACCTTCGGCG CGGGGGTGGC ATCGGATGCC TTCGTGGTAG CGTTCAAGCT GCCCAACCTG CTGCGCCGCA TCTTCGCCGA GGGCGCCTTC TCCCAGGCCT TTGTGCCGAT TCTGGCCGAA TACAAGATGC AGCAGGGCGA GGAGGCCACG CGCACCTTCA TCGCCTACGT GTCCGGTTTG CTGACCTTGG TGCTGGCGCT GGTTACGGCC ATCGGCGTGC TCGCCGCGCC CTGGATCGTC TGGGCCACGG CGCCCGGGTT CGCTGCCGAG GCCGAGCGTT TCGAGCTGAC CGTCGATCTG CTGCGGGTGA CCTTCCCCTA TATATTGCTG ATTTCCCTGT CCTCACTGGC TGGGGCCATT CTCAATACCT GGAACCGCTT CTCGGTGCCG GCATTCGTGC CGACCCTGCT CAACGTCAGC ATGATCGTTT TCGCGCTGTT TCTGACGCCC TATTTCGATC CGCCGATCAT GGCGCTGGGC TGGGCGGTGC TGGTTGGCGG GCTGGCACAG TTGCTCTGGC AACTGCCGCA CCTGAAGAAG ATCGGCATGC TGGTACTGCC GCGCCTGAGT TTCGGCGACC TGGGCGTCTG GCGCGTGCTC AAGCAGATGG GGCCGGCGAT CTTCGGCGTG TCGGTCAGCC AGATTTCCTT GATCATCAAC ACCGTCTTCG CCTCGTTCCT GGTGGCCGGC TCGGTGTCCT GGATGTACTA CGCCGACCGC CTGATGGAGC TGCCCTCGGG GGTGCTGGGC GTGGCGCTGG GGACCATCCT GCTGCCGGCG CTATCGAAAA CCTACGCGAG CAAGGACCGT GACGAATACC GCCGCCTGCT CGACTGGGGG CTGCGCCTGT GCTTCCTGCT GGTGCTGCCC TGCACCCTGG CGCTGGCGAT TCTCGCCGAG CCGCTGGTGG TGTCGCTGTT CCAGTACGGC AAGTTCACCG CCAACGATTC GCTGATGACG CAGCAGGCGC TGATGGCCTA CGCGGTCGGC CTGCTGGCGC TGATCCTGGT GAAGATTCTC GCGCCGGGGT TCTACGCGCA GCAGAACATC AAAACGCCGG TACGCATCGC GGTGGTCAGT CTGCTGGCGA CCCAGGCGAT GAACGCGCTG TTCGTCTTCG GTCTGGAGAT GGCGCACGTC GGCCTGGCGC TGGCGATCAG CCTGGCGGCC TGTCTGAACG CCGGCCTGCT GTACTGGCAA CTGCGCCGCG CCGATATCTT CCAGCCGCTG CCGGGCTGGG GGCTGTTCTT GTTCAAGCTG GCGGTGGCGG TGGCGGTGAT GGTCGCGGTG CTGCTGGGGC TGCTGCAGAT AATGCCGGCC TGGGCCGAGG GCGAGATGCC GCTGCGTCTA CTGCGCCTGG GCGCGCTGGT GCTTGCCGGC GTGGTGGTGT ACTTCGGCAC GCTGCTGCTG TTGGGGTTTC GTCTGCGCGA CTTCGCGCGC AAGGCGCTAT AG
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Protein sequence | MNLLKSLAAV SSLTMVSRVL GFVRDTIIAR TFGAGVASDA FVVAFKLPNL LRRIFAEGAF SQAFVPILAE YKMQQGEEAT RTFIAYVSGL LTLVLALVTA IGVLAAPWIV WATAPGFAAE AERFELTVDL LRVTFPYILL ISLSSLAGAI LNTWNRFSVP AFVPTLLNVS MIVFALFLTP YFDPPIMALG WAVLVGGLAQ LLWQLPHLKK IGMLVLPRLS FGDLGVWRVL KQMGPAIFGV SVSQISLIIN TVFASFLVAG SVSWMYYADR LMELPSGVLG VALGTILLPA LSKTYASKDR DEYRRLLDWG LRLCFLLVLP CTLALAILAE PLVVSLFQYG KFTANDSLMT QQALMAYAVG LLALILVKIL APGFYAQQNI KTPVRIAVVS LLATQAMNAL FVFGLEMAHV GLALAISLAA CLNAGLLYWQ LRRADIFQPL PGWGLFLFKL AVAVAVMVAV LLGLLQIMPA WAEGEMPLRL LRLGALVLAG VVVYFGTLLL LGFRLRDFAR KAL
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