| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0941 |
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| Symbol | |
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| ID | 5108799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1063463 |
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| End bp | 1065259 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640502158 |
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| Product | hypothetical protein |
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| Protein accession | YP_001186441 |
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| Protein GI | 146305976 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00901] AmpG-related permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.274634 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACGCA AATCCTGGCG AGAAGCCCTC GCCACCTACG CCAATCCCGC CACCCTGGCT
CTGCTGCTTC TCGGCTTCGC CGCCGGCCTG CCCTACATGC TGGTGTTCTC GACCCTCTCG
GTGTGGCTGC GCGAAGCCGG CGTGGCGCGC GAGACCATCG GTTTCGCCAG CTTGATCGGC
CTGGCCTACG CCTTCAAGTG GGTATGGGCG CCGATGCTCG ACCAATGGCG CCTGCCGCTG
CTGGGCAAGC TCGGCCGCCG TCGCTCGTGG CTGGTGCTGG CTCAGGGCCT GGTCGCCATC
GGCCTGATCG GCATGGCCAA CTTCGACCCG CAGACCCACC TGTCCTGGCT GATCGCCCTG
GCCGTGCTGG TGGCCTTCGC CTCGGCCACT CAGGACATCG CCGTCGATGC CTACCGCCTG
GAGATTCTCG GCGACGAGCA TCAGGCCGCC CTGGCCGCCG CCTACATGAC CGGTTACCGC
GTCGCCGCGC TGCTGGCCAC CGCAGGCGCG CTGTACTTTG CCGAGGGCTT CGGCTCCACC
GCGAAGAACT ATCAGTTCAG CGCCTGGGCC GGCACCTACC TGGTATTTGC CCTGCTGATG
CTGCCGGGGC TGCTCACCTC CATCTGGATG CGCGAACCGC CGGCCCCGCC GCATATCCAT
GCGCCGCCGC CCAAGCACGG CTTCTTCCAT CAGTTGCTGG CGATCATGGC GGTCATCGTG
CTGGTGATCT CCGTGCCCAC CCTGTTCATC CAGTTCTACC AGAGCGACCT GGTGGCGACG
CTGCTGGGCG ACGTGACGGT GCAGAGCCTG CTCTACAACG ACCGCGCGTT CATGCGGGCG
ATGCTCTATA CCGCGCTGGC CTGCGTCAGC GCCTCCGGGC TGTTCTGGGG TGGCCTGGCG
CCGGTGCTGA AGACCGCGGC GGCGAAGTAC GGCTTCTTCC ACCAGTTGCT TTCCGTGCTG
CTGCTGATCA TTCTGCTGAT CTCCGTGCCG GCGATGGTCA CCCAGTACTA CGACAGCGAT
CTGCTGCTGA TGCTGCAGGG CCAGCTGAGC CTGAAAGACC TGCTGTACTA CGACCGCGCC
TTCCTGCGCG CCCTGCTCTA TACCCTGCTC ACCGGCCTGT CCATTTCCAG CCTGTTCTGG
GGCGGCATGG CGCCGGTGCT GACCCCGGTC AACGATTTCA TCGTGCGTTA TCGCTGGCAG
GCGCTGCTGC TACTGAGCCT GATCGCCACC TATCGCCTGT CCGATACCGT GATGGGGGTG
ATGGCCAACG TCTTCTATAT CGACCAGGGC TTCACCAAGG AACAGATCGC CAGCGTCAGC
AAGGTGTTCG GCCTGATCAT GACCCTCCTC GGTGCCGGCG TCGGCGGCCT GCTCATCGTG
CGTTTCGGCA TCATGCCGAT CCTGCTGATC GGCGCCTTCG CCTCGGCGGC GACCAACCTG
CTGTTCATGC TGCTGGTGGG CATGGGCCCG CACCTGAACA TGCTGATCGT CACCATCAGC
TGCGACAACT TCAGCGCCGG CCTGGCCACC TCCGCTTTCG TCGCCTATCT GTCGAGCCTG
ACCAACCTGA AGTTCTCCGC CACCCAGTAC GCGCTGCTCA GCTCCATCAT GCTGCTGCTG
CCGCGCCTGA TCGGCGGCTA CTCCGGGGTC ATGGTGGAGA AGCTCGGCTA CGCCCACTTC
TTCCTCGCCA CCGCGCTGCT GGGCATCCCG ACGCTGATTC TCATCGCCCT CCAGTGGGGC
CGTGACAGAC GCCAGCCGAC TGACGAGACG CCCACTGCGA CCGCCGAGAA AGCCTGA
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| Protein sequence | MPRKSWREAL ATYANPATLA LLLLGFAAGL PYMLVFSTLS VWLREAGVAR ETIGFASLIG
LAYAFKWVWA PMLDQWRLPL LGKLGRRRSW LVLAQGLVAI GLIGMANFDP QTHLSWLIAL
AVLVAFASAT QDIAVDAYRL EILGDEHQAA LAAAYMTGYR VAALLATAGA LYFAEGFGST
AKNYQFSAWA GTYLVFALLM LPGLLTSIWM REPPAPPHIH APPPKHGFFH QLLAIMAVIV
LVISVPTLFI QFYQSDLVAT LLGDVTVQSL LYNDRAFMRA MLYTALACVS ASGLFWGGLA
PVLKTAAAKY GFFHQLLSVL LLIILLISVP AMVTQYYDSD LLLMLQGQLS LKDLLYYDRA
FLRALLYTLL TGLSISSLFW GGMAPVLTPV NDFIVRYRWQ ALLLLSLIAT YRLSDTVMGV
MANVFYIDQG FTKEQIASVS KVFGLIMTLL GAGVGGLLIV RFGIMPILLI GAFASAATNL
LFMLLVGMGP HLNMLIVTIS CDNFSAGLAT SAFVAYLSSL TNLKFSATQY ALLSSIMLLL
PRLIGGYSGV MVEKLGYAHF FLATALLGIP TLILIALQWG RDRRQPTDET PTATAEKA
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