Gene Pmen_0939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0939 
Symbol 
ID5108797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1061998 
End bp1062477 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content59% 
IMG OID640502156 
Productputative nucleotide-binding protein 
Protein accessionYP_001186439 
Protein GI146305974 
COG category[S] Function unknown 
COG ID[COG1666] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.911761 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.507719 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTCTT TCGACGTGGT GTCGGAACTG GACAAACACG AACTGACCAA CGCGGTCGAC 
AATGCCATCA AGGAGCTTGA TCGCCGCTTC GATCTGCGCG GCAAGTGCAG CATCGAGAGC
AAGGACAAGA CCCTTACCCT GACTGCCGAG GCCGAGTTCA TGCTCGAGCA GATGCTCGAC
ATCGTGCGCA GCAGCCTGAT CAAGCGCAAG ATCGATTGCC AGTGCATGGA AGCCAAGGAC
CCCTATGCTT CCGGCAAGGT GATGAAGCAG GAGGTGACCT TCCGCGAAGG CATCGACAAG
GAGCTGGCGA AGAAGATCGT CGCCCACATC AAGGATGCCA AGCTCAAGGT GCAGGCCGCC
ATCCAGGGCG AGCAGGTGCG CGTCACCGGC AAGAAGCGCG ACGATCTGCA GGAAGCCATC
GCTCTGCTGC GTGGTCACGA GTTCGGCATG CCGCTGCAGT ACAACAACTT CCGCGATTGA
 
Protein sequence
MPSFDVVSEL DKHELTNAVD NAIKELDRRF DLRGKCSIES KDKTLTLTAE AEFMLEQMLD 
IVRSSLIKRK IDCQCMEAKD PYASGKVMKQ EVTFREGIDK ELAKKIVAHI KDAKLKVQAA
IQGEQVRVTG KKRDDLQEAI ALLRGHEFGM PLQYNNFRD