Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0939 |
Symbol | |
ID | 5108797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 1061998 |
End bp | 1062477 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640502156 |
Product | putative nucleotide-binding protein |
Protein accession | YP_001186439 |
Protein GI | 146305974 |
COG category | [S] Function unknown |
COG ID | [COG1666] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.911761 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.507719 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTCTT TCGACGTGGT GTCGGAACTG GACAAACACG AACTGACCAA CGCGGTCGAC AATGCCATCA AGGAGCTTGA TCGCCGCTTC GATCTGCGCG GCAAGTGCAG CATCGAGAGC AAGGACAAGA CCCTTACCCT GACTGCCGAG GCCGAGTTCA TGCTCGAGCA GATGCTCGAC ATCGTGCGCA GCAGCCTGAT CAAGCGCAAG ATCGATTGCC AGTGCATGGA AGCCAAGGAC CCCTATGCTT CCGGCAAGGT GATGAAGCAG GAGGTGACCT TCCGCGAAGG CATCGACAAG GAGCTGGCGA AGAAGATCGT CGCCCACATC AAGGATGCCA AGCTCAAGGT GCAGGCCGCC ATCCAGGGCG AGCAGGTGCG CGTCACCGGC AAGAAGCGCG ACGATCTGCA GGAAGCCATC GCTCTGCTGC GTGGTCACGA GTTCGGCATG CCGCTGCAGT ACAACAACTT CCGCGATTGA
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Protein sequence | MPSFDVVSEL DKHELTNAVD NAIKELDRRF DLRGKCSIES KDKTLTLTAE AEFMLEQMLD IVRSSLIKRK IDCQCMEAKD PYASGKVMKQ EVTFREGIDK ELAKKIVAHI KDAKLKVQAA IQGEQVRVTG KKRDDLQEAI ALLRGHEFGM PLQYNNFRD
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