Gene Pmen_0933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0933 
Symbol 
ID5108791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1055658 
End bp1056290 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content66% 
IMG OID640502150 
Productglutathione S-transferase domain-containing protein 
Protein accessionYP_001186433 
Protein GI146305968 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.250168 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTGC AACTGGTGAT TGGCGACAAG AACTATTCCT CCTGGTCTTT GCGCGCAGCG 
CTGGTGGTCG ATCTGGCCGG CGCCGACTGC GAAGAGGTGT TGGTGCGCCT GTATCAGCCG
GACAGCCGCG CGCAGTTGCT GCGCCATTCG CCCACCGGCA AGGTACCGGT TCTGCTGACC
GAGCAGGGGC CGGTGTGGGA CTCCCTGGCG ATCGCCGAGT ATCTGGCCGA ATGCTACCCC
GAGGCGCAGT TGTGGCCGCA GGAGCGCCAG GCTCGCGCGC TGGCGCGCAG TGTCTGTGCG
GAAATGCACA GCGGCTTCAG TGCCCTGCGC AGCCATTTGC CCATGGACTT GGCGCGGGAC
CAGGCGCTGG CCGAGCTGCC GGATGCGGCG CAGGCCGATA TCGATCGCAT CTGCGCGATC
TGGGCCGAGT GCCGCGAGCG CTATGCCAGC TCGGGCAACT ACCTGTTCGG CCAGGCCAGC
ATCGCCGATG CTTTCTACGC GCCGGTGGCC GCGCGCCTGC GCAGTTATCA TGTGGTGCTG
CCGACAACGG CAGCGGCCTA TGTCGAAACC GTCTACCGCT GGCCGGCGTT CCAACGCTGG
TATCAGGCGG CATTGCAGGA GGTAAAGGGG TGA
 
Protein sequence
MALQLVIGDK NYSSWSLRAA LVVDLAGADC EEVLVRLYQP DSRAQLLRHS PTGKVPVLLT 
EQGPVWDSLA IAEYLAECYP EAQLWPQERQ ARALARSVCA EMHSGFSALR SHLPMDLARD
QALAELPDAA QADIDRICAI WAECRERYAS SGNYLFGQAS IADAFYAPVA ARLRSYHVVL
PTTAAAYVET VYRWPAFQRW YQAALQEVKG