| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0930 |
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| Symbol | |
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| ID | 5108788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1050264 |
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| End bp | 1051184 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640502147 |
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| Product | peptidase M23B |
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| Protein accession | YP_001186430 |
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| Protein GI | 146305965 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0689854 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.707751 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACATTA TCCTGCTGCA CAGCCGACAT GGTTCGGCGC GAACCATCAA TCTCGACCTG
CGCTGGCTGC TGCTGGCCGT CTTCCTGCTC CTCGGTCTGA CGCTGGGGGC CGGCGCCGCG
GTGGGGGCCA AGTGGCTGAC CGCCGAGCCC ATAGCTGATC AGTCGCTGGC CGCGGCCCTG
GATCAGCAGC GCGAGCAGGT CGGTGCGGTG CGCCTGGATG CGCAGCGCCA GCTCGACGCC
TTCGCCGTGC ACGTCGCCGA ACTGCAGGCG CGCCTGACCC GACTCGATGC ACTGGGTGAG
CGTCTGACCG AACTGGCCGA GCTGGACGCC GGCGAGTTCG ATTTTTCCCT GAGCGTCGGG
CAGGGTGGTG CGGAAGATGC CCTCGGCGCC TCGGCCTATG CGCCGCCACC TTTCATGAGC
GCGCTGGATG AGCTGGCGCT GCGTGTGGAG AGCCGCGAGC AGCAGCTGGA AGTGCTGGAA
CAACTGCTCG GCGAGCGTCG TCTGAACGAG GCGGAGATGC TGTCCGGCCG CCCCGTTCTG
CAAGGTTACG TGTCTTCCCC CTTCGGGCGC CGCGTGCACC CGCTGACCGG CCGCTCGAGC
ATGCACAAGG GGATGGATTT CGCTGCCAAA CCTGGTAGCG ACGTGGTGGC GGTGGCCGCC
GGCGTGGTGA CCTTCTCCGG CAAGAAGAGC GGTTACGGCA ATACCGTGGA GATCAGCCAC
GCCGACGGCT ACGTCACCCT CTATGCCCAC AACCAGAGCA ATACGGTGCA GATCGGCGAT
CTCGTGCAGC GTGGCCAGAC CATCGCCAAG GTCGGCCGTA GCGGCCGCTC CACCGGTTAC
CACGTGCATT TCGAGGTCAG CAAGGATGGC CGTCAGGTCA ATCCGGCGCT GTACATCGCC
CGCGCTAACG GCGTCGAGTG A
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| Protein sequence | MHIILLHSRH GSARTINLDL RWLLLAVFLL LGLTLGAGAA VGAKWLTAEP IADQSLAAAL
DQQREQVGAV RLDAQRQLDA FAVHVAELQA RLTRLDALGE RLTELAELDA GEFDFSLSVG
QGGAEDALGA SAYAPPPFMS ALDELALRVE SREQQLEVLE QLLGERRLNE AEMLSGRPVL
QGYVSSPFGR RVHPLTGRSS MHKGMDFAAK PGSDVVAVAA GVVTFSGKKS GYGNTVEISH
ADGYVTLYAH NQSNTVQIGD LVQRGQTIAK VGRSGRSTGY HVHFEVSKDG RQVNPALYIA
RANGVE
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