| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0917 |
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| Symbol | murE |
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| ID | 5108775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1035300 |
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| End bp | 1036763 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640502134 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase |
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| Protein accession | YP_001186417 |
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| Protein GI | 146305952 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
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| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.140752 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCATGC CACTCAATCA ATTGTTGCCG GCCGCCGAGA GCGGCGTGCT GATTCGCGAA
CTGACCCTGG ACAGCCGCAA GGTGCGTCCG GGCGATCTGT TCCTGGCCGT GCCGGGTACC
CAGCAGGACG GCCGCGTGCA TATCGCCGAT GCCGTGGCGC GTGGCGCCGC CGCCGTCGCC
TTCGAAGCCG AAGGCGCCGC ACCCATGCAT GCTGAAAGTG CTGTGCTGGT ACCGGTCAAG
GGGCTGGCTG GCCAGCTCTC GGCCATTGCC GGACGCTTCT ACGGTGAGCC GAGCCGCGCT
CTGCATCTGA TCGGCGTCAC CGGCACCAAC GGCAAGACCA GCGTCAGCCA GCTGCTGGCG
CAGGCCCTGG ATCTGCTCGG CGAACGCTGC GGCATCGTCG GTACCCTAGG CACCGGCTTC
CATGGCGCGC TGGAGCAGGG CAAGCACACC ACGCCCGATC CGGTCGGCGT GCAGGCCACC
CTTGCCTCGC TCAAGCAGGC CGGTGCGCGC GCCGTGGCCA TGGAGGTTTC CTCCCATGGT
CTGGATCAGG GCCGCGTCGC GGCGCTGGAG TTCGACGTGG CGGTGTTCAC CAACCTGTCG
CGCGATCACC TCGATTACCA CGGCAGCATG GAGGCCTATG GCGCCGCCAA GGCCAAGCTG
TTCGCCTGGC CGAACCTGCG TTGCCGGGTC ATCAATCTGG ATGACGCCTT CGGCCGGGAG
CTGGCGCAGC AGGCGCATGA CTCGCGGCTG ATCGGCTACA GCCTGAGCGA CGCCAGCGCC
TTCCTTTATT GCAGCGAAGC GCAGTTCGAC GATCACGGCG TGCGTGCGCG CCTGGTCACG
CCGCGGGGCG AGGGCGTCCT GCGCAGCAAC CTGCTTGGCC GTTTCAATCT GAGCAATCTG
CTGGCGGTGG TCGGTGCGCT ACTGGGCATG GACTATGGCC TGGACGAAAT CCTCAAGGTG
CTGCCGCAAC TGCAGGGGCC GGCCGGCCGC ATGCAGCGCC TGGGTGGCGG CGACAAGCCG
CTGGTGGTGG TGGATTACGC CCACACGCCG GATGCCCTGG AAAAGGTGCT CGAGGCGATG
CGCCCCCATG TGCAGGGTCG TCTGGTCTGC CTGTTCGGTT GCGGCGGTGA CCGTGACCGC
GGCAAGCGCC CGCTGATGGC GGCGGTGGCC GAGCGCCTGG CCGATGTGGT GTGGGTGACC
GACGACAACC CGCGCAGCGA AGATCCGGCG CAGATCGTCG CGGATATCCG CGCCGGCTTC
TGCGCGCCGG AGCAGGTGCA GTTCATTCAC GGCCGTGGCG ATGCCATCGC CCGCCTGATC
GCCCAGGCCG AGGCCGCCGA CGTACTGGTG CTGGCCGGCA AGGGCCACGA GGATTACCAG
GAGATCACGG GCGTGCGCCA TCCCTTCTCC GATCTGATCG AAGCGAACGA GGCCCTGGCG
GCCTGGGAGG CGGCCCATGC TTAA
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| Protein sequence | MPMPLNQLLP AAESGVLIRE LTLDSRKVRP GDLFLAVPGT QQDGRVHIAD AVARGAAAVA
FEAEGAAPMH AESAVLVPVK GLAGQLSAIA GRFYGEPSRA LHLIGVTGTN GKTSVSQLLA
QALDLLGERC GIVGTLGTGF HGALEQGKHT TPDPVGVQAT LASLKQAGAR AVAMEVSSHG
LDQGRVAALE FDVAVFTNLS RDHLDYHGSM EAYGAAKAKL FAWPNLRCRV INLDDAFGRE
LAQQAHDSRL IGYSLSDASA FLYCSEAQFD DHGVRARLVT PRGEGVLRSN LLGRFNLSNL
LAVVGALLGM DYGLDEILKV LPQLQGPAGR MQRLGGGDKP LVVVDYAHTP DALEKVLEAM
RPHVQGRLVC LFGCGGDRDR GKRPLMAAVA ERLADVVWVT DDNPRSEDPA QIVADIRAGF
CAPEQVQFIH GRGDAIARLI AQAEAADVLV LAGKGHEDYQ EITGVRHPFS DLIEANEALA
AWEAAHA
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