Gene Pmen_0916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0916 
Symbol 
ID5108774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1033573 
End bp1035300 
Gene Length1728 bp 
Protein Length575 aa 
Translation table11 
GC content66% 
IMG OID640502133 
Productpeptidoglycan synthetase FtsI 
Protein accessionYP_001186416 
Protein GI146305951 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0768] Cell division protein FtsI/penicillin-binding protein 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGTC TCGAAGGCGC GCTCTATCCC TGGCGTTTTC GCCTGGTGCT GGTGCTGCTC 
GCGCTGATGG TGGGCGCCAT CGCCTGGCGC ATGCTCGATC TGCAGGTGCT GGACCATGAT
TTCCTCAAGG CGCATGGCGA TGCCCGTAGC GTGCGGCATA TTCCGATTCC TGCGCATCGT
GGCCTGATCA CCGATCGCAA CGGCGAGCCG CTGGCGGTCA GTACGCCGGT CACCACCCTG
TGGGCCAACG GCAAGGAGCT GCAGGCCGGT CGCGCCCAAT GGCCGGTGCT GGCTGCGGCG
CTGGGTCAGG ATCCGGCCAA TTTCGCCGCC CGCCTGGAGC AGAACAAGGA GCGCGAGTTC
ATGTATCTGG TGCGTGGCCT GACGCCGGAG AAAGGCCAGA GCGTGCTCGA TCTGAAGGTG
CCGGGCGTGT ACGCCATCGA GGAATTCCGC CGTTTCTACC CGGCCGGCGA AGTGGCTGCT
CATGTGGTCG GCTTTACCGA TATCGACGAC CGCGGTCGCG AGGGCATGGA GCTGGCTTAC
GAAGAATGGC TGGCTGGCGT GCCGGGCAAG CGTCAGGTGC TCAAGGACCG TCGCGGCAAG
CTGATCAAGG ACGTGCAGGT TGCGCAGAAT GCCAAGGCTG GCAAGGCGCT GGCCCTGTCC
ATCGACCTGC GTCTGCAGTA TCTGGCGCAT CGCGAGCTGC GCAATGCCTT GCTCGAGCAC
GATGCCAAGG CCGGCAGCCT GGTGATGGTC GACGTCAAGA CCGGCGAAGT GCTGGCGATG
GTCAACCATC CCACCTACAA CCCGAACAAC CGCCGCAACC TCACTCCGGC GGCCATGCGC
AACCGGGCGA TGATCGACGT GTTCGAGCCC GGCTCGACCA TCAAGCCGCT GTCGATGGCT
GCCGCGCTGG AAACCGGTCG CTGGAAGCCC AGCGACATCG TGCAGGTGGG CAACGGTACG
CTGCAGATCG GCCGCTACAG CATTCGCGAC GTCTCCCGTA CCCAGGGGCC GGCGCTGGAT
CTCACCGGCA TCCTGATCAA CTCCAGCAAC GTCGGCATGA GCAAGATCGC CTTCGACGTG
GGTGGCGATC AGCTGTTCCA GGTCTTCACC AAGCTGGGCT TCGGGCGCGA TACCGGCCTG
GGCTTCCCCG GCGAGCGGGT CGGCAATCTG CCCAATCACC GGCAGTGGCG TCAGGCGGAA
ACCGCGACCC TGTCCTACGG CTATGGTCTG TCGGTCACGG CAGTGCAGCT GGCGCATGCC
TATGCGGCAC TGGCCAACGG CGGTGGCATG ACGCCGCTGT CGATGATTCG CGTCGACGGC
AAGCCGGCCG CGCTGCAGGT GGTGTCGGGC GAGGTCGCCA AGACCATGCA GGGCATGCTG
CAGGAAGTCA CCGAATCGCC GCGCGGTGCC GTGCGCGCCA GGGTTCCCGG TTATCACGTG
GCCGGCAAGA GCGGCACGGC GCGCAAGACC AGCGTCGGCA CCAAGGGTTA CCAGGCCAAC
TCCTACCGTT CGCTGTTTGC CGGTTTCGCC CCTGCGCAGA ACCCGCGCAT CGCGCTGGTG
GTAGTGATCG ACGAGCCAGG CAAGGGCGCC TACTACGGCG GCCTGATTTC CGCCCCGGTG
TTCAGCCGGG TGATGGCAGG CTCGCTGCGT TTGATGAACA TCGCGCCAGA CAATCTGCCG
CCGCCCGAGC AGAAGATGGC GGCCGTTGGC CAAGGAGGGC GCAACTGA
 
Protein sequence
MIGLEGALYP WRFRLVLVLL ALMVGAIAWR MLDLQVLDHD FLKAHGDARS VRHIPIPAHR 
GLITDRNGEP LAVSTPVTTL WANGKELQAG RAQWPVLAAA LGQDPANFAA RLEQNKEREF
MYLVRGLTPE KGQSVLDLKV PGVYAIEEFR RFYPAGEVAA HVVGFTDIDD RGREGMELAY
EEWLAGVPGK RQVLKDRRGK LIKDVQVAQN AKAGKALALS IDLRLQYLAH RELRNALLEH
DAKAGSLVMV DVKTGEVLAM VNHPTYNPNN RRNLTPAAMR NRAMIDVFEP GSTIKPLSMA
AALETGRWKP SDIVQVGNGT LQIGRYSIRD VSRTQGPALD LTGILINSSN VGMSKIAFDV
GGDQLFQVFT KLGFGRDTGL GFPGERVGNL PNHRQWRQAE TATLSYGYGL SVTAVQLAHA
YAALANGGGM TPLSMIRVDG KPAALQVVSG EVAKTMQGML QEVTESPRGA VRARVPGYHV
AGKSGTARKT SVGTKGYQAN SYRSLFAGFA PAQNPRIALV VVIDEPGKGA YYGGLISAPV
FSRVMAGSLR LMNIAPDNLP PPEQKMAAVG QGGRN