Gene Pmen_0910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0910 
Symbol 
ID5108768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1027946 
End bp1028305 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content64% 
IMG OID640502126 
Producthypothetical protein 
Protein accessionYP_001186410 
Protein GI146305945 
COG category[L] Replication, recombination and repair 
COG ID[COG0792] Predicted endonuclease distantly related to archaeal Holliday junction resolvase 
TIGRFAM ID[TIGR00252] conserved hypothetical protein TIGR00252 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.21322 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCAGCC ATAACGATCT TGGTCGAGCC TCCGAACTGG CGGCTCGACA GCATCTGGAA 
CGCAACGGCC TGCGCCTGAT CCAACAGAAC TGGAGCTGTC GCCGTGGCGA GCTCGATCTG
GTCATGCTCG ACGGCGATAC AGTAGTATTT GTCGAAGTCC GCGCCCGCCG CCACAGCGCC
TGGGGCGGCG CCCTGGAGAG TGTCGATGCG CGCAAGCGTG GCAAGTTGGT CATGGCCGCC
GAGCTCTTTC TCCAGCAAAA CTCCCGCTGG GCCCGCCACC CCTGCCGCTT CGACGTGGTC
GCCATCAGTA CCGAGGGCGC CACTCGCCTC GACTGGATCA AGAACGCCTT CGATGCCTGA
 
Protein sequence
MSSHNDLGRA SELAARQHLE RNGLRLIQQN WSCRRGELDL VMLDGDTVVF VEVRARRHSA 
WGGALESVDA RKRGKLVMAA ELFLQQNSRW ARHPCRFDVV AISTEGATRL DWIKNAFDA