Gene Pmen_0907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0907 
Symbol 
ID5108765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1026303 
End bp1026716 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content63% 
IMG OID640502123 
ProductClpXP protease specificity-enhancing factor 
Protein accessionYP_001186407 
Protein GI146305942 
COG category[R] General function prediction only 
COG ID[COG2969] Stringent starvation protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.168937 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCCA GTCGTCCCTA CCTGATCCGT GCTCTTTACG AATGGATAGT CGATAACGAC 
TGCACACCAC ACCTGCTGGT CAATGCCGAG TTCCCCGGTG TCCAGGTTCC GTCCGGTTTC
GCCAGCGACG GCCAGATCGT GCTGAACGCT TCGCCCAGTG CCGTTCGCCA TCTGCATATG
GATAACCAGG CCGTCAGCTT CGAGGGTCGC TTTGGTGGTG TGGCGCACAG CCTGTACATC
CCGGCGGCGG CGGTCCTGGC GATCTATGCG CGGGAAAATG GCCAGGGCAT GGTGTTCGAC
ATGGAGCCGC CAATGGCCGG CGGCCCGGAA GAGTCGGGAC CGGATGACGA CGGTCCGTCC
GGTGGCGAAC CGCCGCGTCC CAGCGGCCGG CCAAGCCTGA AGGTGGTCAA GTAA
 
Protein sequence
MNSSRPYLIR ALYEWIVDND CTPHLLVNAE FPGVQVPSGF ASDGQIVLNA SPSAVRHLHM 
DNQAVSFEGR FGGVAHSLYI PAAAVLAIYA RENGQGMVFD MEPPMAGGPE ESGPDDDGPS
GGEPPRPSGR PSLKVVK