| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0905 |
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| Symbol | |
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| ID | 5108763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1024727 |
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| End bp | 1025506 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640502121 |
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| Product | cytochrome c1-like protein |
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| Protein accession | YP_001186405 |
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| Protein GI | 146305940 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2857] Cytochrome c1 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.111251 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGC TCTTCGCTGC ATTTGTTTTC GCTGCGCTGC CGGCTCTGGC CATGGGCGCC
TCCAGCAACT ATCCGCTGGA CAAGGTAGAT ATCGATCTGC GCGACCAGGC TGCCCTGCAG
GACGGCGCGC GCACCTTCGC CAACTACTGC ATGGGCTGCC ATGCCGCCCA GTACCAGCGT
TACGAGCGCG TTGCCGATGA CCTCGGCATC CCGCACGAAA TCATGCTCGA CAATCTGGTG
TTCAACGACG CCAAGATCGG CGACCACATG AAGATCGGCA TGCGCCCCGA CGACGCCAAG
GCCTGGTTCG GCGCGGCGCC GCCCGACCTG ACCCTGGTCG CTCGCGTGCG CGGCAACGAC
TGGCTGTACA CCTACCTGCG TACCTTCTAC GACGATCCGT CCCGTCCGCT GGGAGCCAAC
AACAAGGTAT TCCCCAACGT CGGCATGCCG AACGTGCTGG TCAGCCTGCA GGGCAAGCAG
GTGATCGGTT GCAAGCAGGT TCAGGTGGTG GAGAACGGCA AGAAGCAGTT CGACCCGCTG
ACCGGCGCGC CGATCACCCA CGAAGCCTGC GATCAGCTGA CCATCGAGCC GAACACCGGC
AAGCTGAGCG AGGCCGAGTT CGACGAGAAG ATCAAGAACC TAGTGACCTT CCTGGCCTAC
TCGGCCAACC CGGTCAAGCT GAAGTCCCAG CGCATCGGTA CCTATGTGCT GCTGTACCTG
GCGTTCTTCT TCGTGTTCGC CTACCTGCTC AAGCGTGAGT ACTGGAAGGA CGTTCACTAA
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| Protein sequence | MKKLFAAFVF AALPALAMGA SSNYPLDKVD IDLRDQAALQ DGARTFANYC MGCHAAQYQR
YERVADDLGI PHEIMLDNLV FNDAKIGDHM KIGMRPDDAK AWFGAAPPDL TLVARVRGND
WLYTYLRTFY DDPSRPLGAN NKVFPNVGMP NVLVSLQGKQ VIGCKQVQVV ENGKKQFDPL
TGAPITHEAC DQLTIEPNTG KLSEAEFDEK IKNLVTFLAY SANPVKLKSQ RIGTYVLLYL
AFFFVFAYLL KREYWKDVH
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