Gene Pmen_0901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0901 
SymbolrplM 
ID5108759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1021834 
End bp1022262 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content57% 
IMG OID640502117 
Product50S ribosomal protein L13 
Protein accessionYP_001186401 
Protein GI146305936 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0102] Ribosomal protein L13 
TIGRFAM ID[TIGR01066] ribosomal protein L13, bacterial type 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACTT TTACTGCTAA ACCGGAAACA GTAAAACGCG ATTGGTTCGT CGTTGATGCT 
GCTGGTCAGA CCCTGGGTCG TCTGGCCACC GAAATCGCGA GCCGTCTGCG TGGCAAGCAC
AAGCCTGAGT ACACCCCGCA CGTTGACACC GGTGACTACA TCGTCGTCAT CAACGCCGAG
CAGGTGCGTG TAACTGGTGC CAAAGCCAGC GACAAGAAGT ACTACTCCCA CTCCGGTTTC
CCGGGCGGCA TCAAAGAGAT CAACTTCGAG AAGCTGATCG CTCGTGCTCC TGAGCGCGTG
ATCGAGACCG CGGTCAAAGG CATGCTGCCG AAGAACCCGC TGGGTCGCGA CATGTACCGT
AAGCTGAAGG TGTACAAGGG TGCCGCTCAC CCGCACACCG CTCAGCAGCC CCAAGAACTG
AAGATTTAA
 
Protein sequence
MKTFTAKPET VKRDWFVVDA AGQTLGRLAT EIASRLRGKH KPEYTPHVDT GDYIVVINAE 
QVRVTGAKAS DKKYYSHSGF PGGIKEINFE KLIARAPERV IETAVKGMLP KNPLGRDMYR
KLKVYKGAAH PHTAQQPQEL KI