| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0900 |
|---|
| Symbol | |
|---|
| ID | 5108758 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 1020548 |
|---|
| End bp | 1021585 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640502116 |
|---|
| Product | aldo/keto reductase |
|---|
| Protein accession | YP_001186400 |
|---|
| Protein GI | 146305935 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.933192 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATACC GCAAGCTAGG CCGAACCGAT CTCGATGTCA GCGCACTGTG CCTGGGCACC
ATGACCTGGG GCGAGCAGAA CAGCGAGAGC GAAGGCCACG CCCAGATCGA ACGGGCCAAG
GCCAGCGGCA TCAACTTCAT CGACACCGCC GAGATGTATC CGGTGCCGCC GCGCGCCGAA
ACCTACAGCA GGACCGAGCA GATCATCGGC AGCTACTTCA AGCGGCATGG CGACCGCGCC
GACTGGATTC TGGCGAGCAA GATCGCCGGC CCCGGCAACG GCATCAGCCA TATCCGCGAC
GGCCAGCTCA AATTCAACCG CGAGCACATC GTCGCCGCAC TGGATGCCAG CCTCAAGCGC
CTGCAGACCG ACTGGATCGA TCTGTACCAG CTGCACTGGC CGGAACGCCC GACCAATTTC
TTCGGCCAGC TCGGCTACCA GCATCGCGAC GCGGACTTCA CGCCACTAGA AGAAACCCTG
GAAGTGCTCG ACGAGCAGGT CAAGGCCGGC AAGATTCGCC ACATCGGCCT GTCCAACGAA
ACGCCGTGGG GCACCATGAA GTTCCTGCAA CTGGCCGAGA GCCGCGGCTG GCCACGCGCG
GTATCGATCC AGAATCCCTA CAACCTGCTC AACCGCAGCT TCGAAGTGGG CCTGGCGGAA
GTGGCGATTC GCGAACAGTG CGGCCTGCTG GCCTATTCAC CCCTGGCATT CGGCATGCTC
AGCGGAAAAT ACGAGGGCGG CGCCCGCCCG GCCGGTGCAC GTATCAGCCT GTTCAGCCGC
TTCGCCCGCT ACACCAACCC GCAGGCCGAG GCAGCCTGCT CGCGCTACGT CGCCCTGGCC
CGCGAGCATG GCCTGGATCC GGCGCAGATG GCGCTGGCCT TCGTCACCGC GCAGCCCTTC
GTGACCAGCA ACATCATCGG CGCCACTAGC CTGGAGCAAC TGGACAGCAA CCTGGCCAGT
GCCGGATTGA AGCTCTCCGA GGAAGTGCTC GCCGGCATCG AGGCGATTCA CAAGGCGCAG
CCCAACCCCG CGCCCTAA
|
|---|
| Protein sequence | MEYRKLGRTD LDVSALCLGT MTWGEQNSES EGHAQIERAK ASGINFIDTA EMYPVPPRAE
TYSRTEQIIG SYFKRHGDRA DWILASKIAG PGNGISHIRD GQLKFNREHI VAALDASLKR
LQTDWIDLYQ LHWPERPTNF FGQLGYQHRD ADFTPLEETL EVLDEQVKAG KIRHIGLSNE
TPWGTMKFLQ LAESRGWPRA VSIQNPYNLL NRSFEVGLAE VAIREQCGLL AYSPLAFGML
SGKYEGGARP AGARISLFSR FARYTNPQAE AACSRYVALA REHGLDPAQM ALAFVTAQPF
VTSNIIGATS LEQLDSNLAS AGLKLSEEVL AGIEAIHKAQ PNPAP
|
|---|
| |