Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0899 |
Symbol | |
ID | 5108757 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 1019838 |
End bp | 1020551 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640502115 |
Product | endonuclease V |
Protein accession | YP_001186399 |
Protein GI | 146305934 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1515] Deoxyinosine 3'endonuclease (endonuclease V) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.880865 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGAT TGAGCGATCT GGCCGCGTCC CCGTTCCCGG ATTGGGACGG CAGCCCGGCG GCTGCCCGTG AGCTGCAGAC GCACCTGGCC AGGCAAGTAC GACTGGAAGA CGACCACCCG CCGTTGCGGC GCCTGGCGGG CGTGGATGTC GGCTTCGAGG AAGGCGGCGC CATCACGCGC GCTGCCGCAG TGCTACTGGA TGCCGATACG CTGCAGCCGC TGGCCGAATG CGTGGTCCGC ATTCCCACCA GCATGCCCTA TGTGCCGGGG CTGCTGTCCT TTCGCGAGTT GCCGGCCCTT CTGCAGGCAT TGGCCGGCTT GCCGCAGGAG CCGGATCTGA TTTTCGTCGA CGGTCACGGC ATTGCCCATC CGCGCGGCTT GGGCATCGCC GCGCACCTGG GGGTGGTCAG CGGCTTTGCA ACCATCGGCG TGGCCAAGAA GATCCTGACC GGACATCACG CCGAGCTGGC CGAGACGCGT GGAGCGCGGA TCGAGCTGCT GAGCAGGAGA GGCGAGCAGA TCGGCTGGGT GCTGCGCAGC AAGGATCGCG TGCGGCCGTT GATCGTCTCG CCGGGCAATC GGGTCAGCCT CGAACGTGTC CCGGAGCTGG TCATGGCGTG CGTCAGGCGT CACCGCCTGC CCGAGCCGAC CCGGCTGGCC GATCGCCTCG CCTCGCGACG CGACGCCAGG AACGATCAGC CCTCTCTTTT TTAG
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Protein sequence | MSRLSDLAAS PFPDWDGSPA AARELQTHLA RQVRLEDDHP PLRRLAGVDV GFEEGGAITR AAAVLLDADT LQPLAECVVR IPTSMPYVPG LLSFRELPAL LQALAGLPQE PDLIFVDGHG IAHPRGLGIA AHLGVVSGFA TIGVAKKILT GHHAELAETR GARIELLSRR GEQIGWVLRS KDRVRPLIVS PGNRVSLERV PELVMACVRR HRLPEPTRLA DRLASRRDAR NDQPSLF
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