| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0897 |
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| Symbol | |
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| ID | 5108755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1017477 |
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| End bp | 1018484 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640502113 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001186397 |
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| Protein GI | 146305932 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.825741 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGATCT CCCAGCCGCG TGCGGCCCTG CATCGCGTCA GCATTCTCGC CACCGACGGC
GTGTTCGCCT CCACCCTGAT GCAGGCCAAG GACTTCTTCC ACATGGCCGG CATCCGTTAC
GCCAAGCAGC AGGGGCTTGG CCATGAGCCG CCCTTCGAGA TTCGCCTGGT CAGCCCGGAT
GGCCAGCCGG TGAACAGCTT CAGCAAGGTG CAGGTTCCCG TGGACGGGAG CCTGGAAGCC
TGTGACGTGA TCATCCTGCC GGCCTTCTGG GACGATTTCG ATGCACTCAG CCGCCGCTAC
CCGCAGGTGC TGGACTGGCT CAGACGCCAG CATGCGGCCG GTACGGCGAT CTGCGGCGAA
GCCAGCGGGG TGTTCTGGAT GGCCGAGGCC GGCCTGCTCG ACGGCAAGGA AGCGACCACC
TACTGGCGCT TCTTCGGCGA ATTCGCTCAG CGCTTCCCCA AGGTGCTGCT CAATCAGGAC
AAGCACCTGT CCGATGCCGA CAACCTGTAT TGCGCCGGCG GCGTCACCTC GGCCTGCGAC
CTCTACATCT ACCTGATCGA ACGCTACTGC GGCGCCAGCG TGGCCCAGGG CGTGGCCCGC
GACATCCTCT ACGAGGTGCA GCGCAGCTAC ACCCCCGGAC GCATCGGTTT CGGCGGGCAG
AAACTGCATC AGGACGTCAC CGTACTGCAG ATCCAGCAGT GGCTGGAGGA GCACTACGCC
GACAAGTTCC GCTTCGAGGA CGTGGCCCGT GAACACGGCA TGAGCATCCG CAACTTCATG
CGCCGCTTCC AGGGCGCCAC GGGCGACAAG CCGCTGCATT ACCTGCAGCG CCTGCGCATC
GAAACCGCGA AGAGCCTGCT CTCCTCCACC CGCAAGAGCA TCAAGACCAT CAGCTACGAG
GTCGGCTACG ACGACGCCAG TTTCTTCGCC CGCCTGTTCC GCCAGCACAC CGAGCTGTCG
CCCAACCAGT ACCGCCGCCA GTTTCAGCAC AAGGACAACC CGGGCTGA
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| Protein sequence | MVISQPRAAL HRVSILATDG VFASTLMQAK DFFHMAGIRY AKQQGLGHEP PFEIRLVSPD
GQPVNSFSKV QVPVDGSLEA CDVIILPAFW DDFDALSRRY PQVLDWLRRQ HAAGTAICGE
ASGVFWMAEA GLLDGKEATT YWRFFGEFAQ RFPKVLLNQD KHLSDADNLY CAGGVTSACD
LYIYLIERYC GASVAQGVAR DILYEVQRSY TPGRIGFGGQ KLHQDVTVLQ IQQWLEEHYA
DKFRFEDVAR EHGMSIRNFM RRFQGATGDK PLHYLQRLRI ETAKSLLSST RKSIKTISYE
VGYDDASFFA RLFRQHTELS PNQYRRQFQH KDNPG
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