Gene Pmen_0891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0891 
Symbol 
ID5108749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1010334 
End bp1012229 
Gene Length1896 bp 
Protein Length631 aa 
Translation table11 
GC content66% 
IMG OID640502107 
Productbifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein 
Protein accessionYP_001186391 
Protein GI146305926 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0529] Adenylylsulfate kinase and related kinases
[COG2895] GTPases - Sulfate adenylate transferase subunit 1 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00455] adenylylsulfate kinase (apsK)
[TIGR02034] sulfate adenylyltransferase, large subunit 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCACC AGTCTGATCT GATCAGCGAG GACATCCTCG CCTACCTGGC CCAGCACGAA 
CGCAAGGAGC TGCTGCGCTT CCTCACCTGC GGCAACGTCG ACGACGGCAA GAGCACCCTG
ATCGGGCGCC TGCTGCACGA CTCCAAGATG ATCTACGAGG ACCATCTGGA GGCCATCAGC
CGCGACTCGA AGAAAGTCGG CACCACCGGT GACGACATCG ATCTGGCGCT GCTGGTCGAC
GGCCTGCAGG CCGAGCGCGA GCAGGGCATC ACCATCGACG TGGCCTACCG CTACTTCAGC
ACCGCCAAGC GCAAGTTCAT CATCGCCGAC ACTCCCGGCC ATGAGCAGTA CACCCGCAAC
ATGGCCACCG GCGCGTCCAC CTGCGACCTG GCGATCATCC TGATCGACGC CCGTTACGGC
GTGCAGACCC AGACCAAGCG CCACAGCTTC ATCGCCTCCC TGCTGGGCAT CAAGCATATC
GTCGTCGCGG TCAACAAGAT GGATCTTAAG GGCTTCGACC AGGCTGTGTT CGAGCAGATC
AAGGCCGATT ACCTGAAGTT CGCCGAAGGC ATCGCGCTCA AGCCGAGCAC GCTGCATTTC
GTGCCGATGT CGGCGCTCAA GGGCGACAAC GTGGTCAACA AGTCCGAGCG CTCGCCCTGG
TACGACGGCC AGTCGCTGAT GGAAATCCTC GAGACCGTGG AAGTGGCGGG TGATCGCAAC
TTCGACGACC TGCGCTTCCC GGTGCAGTAC GTCAACCGTC CCAACCTGAA CTTCCGCGGC
TTCGCCGGCA CCCTGGCCAG CGGCATCGTG CGCAAGGGCG ACGAAGTGAT GGCGCTGCCG
TCGGGCAAGA CCAGCCGGGT CAAGTCCATC GTCACCTTCG AGGGCGAGCT GGAGCACGCC
GGTCCGGGCC AGGCCATCAC CCTGACCCTG GAAGACGAGA TCGACGTGTC GCGCGGCGAC
ATGCTGGTGC ATGCCGACAA TCGTCCGCAG GTCACCGACA GCTTCGAGGC CATGCTGGTG
TGGATGGGCG AAGAGCCGAT GCTGCCGGGC AAGAAATACG ACATCAAGCG CGCCACCAGC
TATGTGCCGG GCTCGATCCC CAGCATCGTT CACCGCGTCG ACGTGAACAC CCTGGAGCAG
GGCGCGGCCA GCGAGCTGAA GCTCAACGAG ATCGGTCGGG TCAAGGTCGC CCTGGATGCG
CCGATTGCCC TGGATGGGTA CGAGTACAAC CGCACCACCG GTGCCTTCAT CGTCATCGAC
CGCCTGACCA ACGGCACCGT CGGCGCCGGC ATGATCATCG CCGACCCGGT GGCGCAGGGT
GGCGGCCAGC ACGGTCGTCT GGCCCACGTA TCGACCGAGG AGCGCGCCGC GCGCTTCGGC
CAGCAGCCGG CCACCGTGCT GTTCAGCGGC CTGTCCGGCG CCGGCAAGAG CACCCTGGCC
TATGCCGTGG AACGCAAGCT GTTCGACATG GGCCGTGCGG TATACGTGCT CGACGGGCAG
AACCTGCGCC ATGATCTGAA CAAGGGCCTG CCGCAGGACC GCGCCGGCCG CGCCGAGAAC
TGGCGCCGCG CCGCGCATGT GGCGCGTCAG TTCAACGAGG CCGGGATGAT CGCCCTGGCC
GCCTTCGTCG CCCCGGATGC CGAAGGTCGC GAGCAGGCCA AGGTGCTGAT CGGCGGCGAA
CGTCTGGTTA CCGTGTACGT GCAGGCCTCG CCGCAGGTTT GCCGTGAACG CGACCCGCAG
GGCCTGTACG CTGCCGGCGG CGACAACATC CCGGGCGAGG GCTTCCCCTA CGACGTGCCG
CTGGATGCCG ATCTGGTGAT CGACACCCAG ACGCAGTCGG TCGAGGAGGG CGTCAAGGCA
GTACTGGATC TGCTGCGTAG CCGCGGCGCG ATCTGA
 
Protein sequence
MSHQSDLISE DILAYLAQHE RKELLRFLTC GNVDDGKSTL IGRLLHDSKM IYEDHLEAIS 
RDSKKVGTTG DDIDLALLVD GLQAEREQGI TIDVAYRYFS TAKRKFIIAD TPGHEQYTRN
MATGASTCDL AIILIDARYG VQTQTKRHSF IASLLGIKHI VVAVNKMDLK GFDQAVFEQI
KADYLKFAEG IALKPSTLHF VPMSALKGDN VVNKSERSPW YDGQSLMEIL ETVEVAGDRN
FDDLRFPVQY VNRPNLNFRG FAGTLASGIV RKGDEVMALP SGKTSRVKSI VTFEGELEHA
GPGQAITLTL EDEIDVSRGD MLVHADNRPQ VTDSFEAMLV WMGEEPMLPG KKYDIKRATS
YVPGSIPSIV HRVDVNTLEQ GAASELKLNE IGRVKVALDA PIALDGYEYN RTTGAFIVID
RLTNGTVGAG MIIADPVAQG GGQHGRLAHV STEERAARFG QQPATVLFSG LSGAGKSTLA
YAVERKLFDM GRAVYVLDGQ NLRHDLNKGL PQDRAGRAEN WRRAAHVARQ FNEAGMIALA
AFVAPDAEGR EQAKVLIGGE RLVTVYVQAS PQVCRERDPQ GLYAAGGDNI PGEGFPYDVP
LDADLVIDTQ TQSVEEGVKA VLDLLRSRGA I