Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0891 |
Symbol | |
ID | 5108749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 1010334 |
End bp | 1012229 |
Gene Length | 1896 bp |
Protein Length | 631 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640502107 |
Product | bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein |
Protein accession | YP_001186391 |
Protein GI | 146305926 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0529] Adenylylsulfate kinase and related kinases [COG2895] GTPases - Sulfate adenylate transferase subunit 1 |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00455] adenylylsulfate kinase (apsK) [TIGR02034] sulfate adenylyltransferase, large subunit |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCACC AGTCTGATCT GATCAGCGAG GACATCCTCG CCTACCTGGC CCAGCACGAA CGCAAGGAGC TGCTGCGCTT CCTCACCTGC GGCAACGTCG ACGACGGCAA GAGCACCCTG ATCGGGCGCC TGCTGCACGA CTCCAAGATG ATCTACGAGG ACCATCTGGA GGCCATCAGC CGCGACTCGA AGAAAGTCGG CACCACCGGT GACGACATCG ATCTGGCGCT GCTGGTCGAC GGCCTGCAGG CCGAGCGCGA GCAGGGCATC ACCATCGACG TGGCCTACCG CTACTTCAGC ACCGCCAAGC GCAAGTTCAT CATCGCCGAC ACTCCCGGCC ATGAGCAGTA CACCCGCAAC ATGGCCACCG GCGCGTCCAC CTGCGACCTG GCGATCATCC TGATCGACGC CCGTTACGGC GTGCAGACCC AGACCAAGCG CCACAGCTTC ATCGCCTCCC TGCTGGGCAT CAAGCATATC GTCGTCGCGG TCAACAAGAT GGATCTTAAG GGCTTCGACC AGGCTGTGTT CGAGCAGATC AAGGCCGATT ACCTGAAGTT CGCCGAAGGC ATCGCGCTCA AGCCGAGCAC GCTGCATTTC GTGCCGATGT CGGCGCTCAA GGGCGACAAC GTGGTCAACA AGTCCGAGCG CTCGCCCTGG TACGACGGCC AGTCGCTGAT GGAAATCCTC GAGACCGTGG AAGTGGCGGG TGATCGCAAC TTCGACGACC TGCGCTTCCC GGTGCAGTAC GTCAACCGTC CCAACCTGAA CTTCCGCGGC TTCGCCGGCA CCCTGGCCAG CGGCATCGTG CGCAAGGGCG ACGAAGTGAT GGCGCTGCCG TCGGGCAAGA CCAGCCGGGT CAAGTCCATC GTCACCTTCG AGGGCGAGCT GGAGCACGCC GGTCCGGGCC AGGCCATCAC CCTGACCCTG GAAGACGAGA TCGACGTGTC GCGCGGCGAC ATGCTGGTGC ATGCCGACAA TCGTCCGCAG GTCACCGACA GCTTCGAGGC CATGCTGGTG TGGATGGGCG AAGAGCCGAT GCTGCCGGGC AAGAAATACG ACATCAAGCG CGCCACCAGC TATGTGCCGG GCTCGATCCC CAGCATCGTT CACCGCGTCG ACGTGAACAC CCTGGAGCAG GGCGCGGCCA GCGAGCTGAA GCTCAACGAG ATCGGTCGGG TCAAGGTCGC CCTGGATGCG CCGATTGCCC TGGATGGGTA CGAGTACAAC CGCACCACCG GTGCCTTCAT CGTCATCGAC CGCCTGACCA ACGGCACCGT CGGCGCCGGC ATGATCATCG CCGACCCGGT GGCGCAGGGT GGCGGCCAGC ACGGTCGTCT GGCCCACGTA TCGACCGAGG AGCGCGCCGC GCGCTTCGGC CAGCAGCCGG CCACCGTGCT GTTCAGCGGC CTGTCCGGCG CCGGCAAGAG CACCCTGGCC TATGCCGTGG AACGCAAGCT GTTCGACATG GGCCGTGCGG TATACGTGCT CGACGGGCAG AACCTGCGCC ATGATCTGAA CAAGGGCCTG CCGCAGGACC GCGCCGGCCG CGCCGAGAAC TGGCGCCGCG CCGCGCATGT GGCGCGTCAG TTCAACGAGG CCGGGATGAT CGCCCTGGCC GCCTTCGTCG CCCCGGATGC CGAAGGTCGC GAGCAGGCCA AGGTGCTGAT CGGCGGCGAA CGTCTGGTTA CCGTGTACGT GCAGGCCTCG CCGCAGGTTT GCCGTGAACG CGACCCGCAG GGCCTGTACG CTGCCGGCGG CGACAACATC CCGGGCGAGG GCTTCCCCTA CGACGTGCCG CTGGATGCCG ATCTGGTGAT CGACACCCAG ACGCAGTCGG TCGAGGAGGG CGTCAAGGCA GTACTGGATC TGCTGCGTAG CCGCGGCGCG ATCTGA
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Protein sequence | MSHQSDLISE DILAYLAQHE RKELLRFLTC GNVDDGKSTL IGRLLHDSKM IYEDHLEAIS RDSKKVGTTG DDIDLALLVD GLQAEREQGI TIDVAYRYFS TAKRKFIIAD TPGHEQYTRN MATGASTCDL AIILIDARYG VQTQTKRHSF IASLLGIKHI VVAVNKMDLK GFDQAVFEQI KADYLKFAEG IALKPSTLHF VPMSALKGDN VVNKSERSPW YDGQSLMEIL ETVEVAGDRN FDDLRFPVQY VNRPNLNFRG FAGTLASGIV RKGDEVMALP SGKTSRVKSI VTFEGELEHA GPGQAITLTL EDEIDVSRGD MLVHADNRPQ VTDSFEAMLV WMGEEPMLPG KKYDIKRATS YVPGSIPSIV HRVDVNTLEQ GAASELKLNE IGRVKVALDA PIALDGYEYN RTTGAFIVID RLTNGTVGAG MIIADPVAQG GGQHGRLAHV STEERAARFG QQPATVLFSG LSGAGKSTLA YAVERKLFDM GRAVYVLDGQ NLRHDLNKGL PQDRAGRAEN WRRAAHVARQ FNEAGMIALA AFVAPDAEGR EQAKVLIGGE RLVTVYVQAS PQVCRERDPQ GLYAAGGDNI PGEGFPYDVP LDADLVIDTQ TQSVEEGVKA VLDLLRSRGA I
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