| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0888 |
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| Symbol | |
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| ID | 5108746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1007259 |
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| End bp | 1008401 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640502104 |
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| Product | 2-alkenal reductase |
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| Protein accession | YP_001186388 |
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| Protein GI | 146305923 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family
[TIGR02038] periplasmic serine pepetdase DegS |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCAGG CCCTGCGTTT TCTCGGATGG CCCCTGCTGG TCGGCGTGCT GCTCGCGCTG
CTGCTGATCC AGCGCTACCC GCAATGGGTA GGTCTGCCAA GCCAGGACGT GCAACTGGTG
CAGGCGCCAC TGTACAGCCG CCTGCAGGAG GGCCCGGTGT CCTATGCCGA AGCCGTGGAT
ACCGCCTCAC CGGCAGTAGC CAACCTGTAC ACCACCAAGC TGGTGAGCAA ACCGGCGCAT
CCGCTGTTCG AAGACCCCAC CTTCCGCCGC TTCTTCGGCG ACAACCTGCC ACGCCAGCAG
CGCATGGAAT CGAGCCTGGG CTCGGCAGTG CTGATGAGCA AGGAAGGCTA TCTGCTGACC
AACAACCATG TGGTCAGCGG CGCCGACCAG ATCATAGTGG CCCTCAAGGA CGGCCGGGAA
ACCCTGGCCC GAGTGATCGG CAACGACCCG GAAACCGACC TGGCGGTGCT GAAGATCGAC
CTGCCCGATC TGCCGGCGAT CACCCTGGGG CGCTCCGACA GCATCCGCAT CGGCGATGTC
ACCCTGGCCA TCGGCAACCC CTTCGGCGTC GGCCAGACGG TGACCATGGG CATCATCAGC
GCCACCGGCC GCAACCAGCT GGGCCTCAAC ACCTACGAGG ACTTCATCCA GACCGACGCG
GCGATCAACC CGGGCAACTC GGGCGGCGCG CTGGTGGACG CCCACGGCAA CCTGGTGGGC
ATCAACACCG CGATCTTCTC CAAGTCCGGT GGCTCGCAGG GCATCGGCTT CGCCATTCCG
GTCAAGCTGG CACTGGAGGT GATGCGCGCG ATCATCGAGC ACGGCCAGGT GATCCGCGGC
TACCTGGGCG TCGAGGTGCA ACCGCTGACG CCCGAACTGG CGGAATCCTT CGGCCTGGAA
GGACGCCCCG GCATCGTCGT CGCCGGCGTC TATCGTGACG GCCCGGCGCA GAAGGCCGGA
CTGCAGCCCG GCGACCTGAT CCTCAGCATC GATGGCGAAC CGGCCAGCGA CGGCCGCCGC
TCGATGAATC AGGTGGCGCG CACCAAGCCG GGCGACAAGA TCCGCATCGA GGTGATGCGC
AACGGCAAGT CGCTCACCCT GACCGCAGAA GTCGGCATCC GCCCCCCCAT CAACGGCAAC
TGA
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| Protein sequence | MPQALRFLGW PLLVGVLLAL LLIQRYPQWV GLPSQDVQLV QAPLYSRLQE GPVSYAEAVD
TASPAVANLY TTKLVSKPAH PLFEDPTFRR FFGDNLPRQQ RMESSLGSAV LMSKEGYLLT
NNHVVSGADQ IIVALKDGRE TLARVIGNDP ETDLAVLKID LPDLPAITLG RSDSIRIGDV
TLAIGNPFGV GQTVTMGIIS ATGRNQLGLN TYEDFIQTDA AINPGNSGGA LVDAHGNLVG
INTAIFSKSG GSQGIGFAIP VKLALEVMRA IIEHGQVIRG YLGVEVQPLT PELAESFGLE
GRPGIVVAGV YRDGPAQKAG LQPGDLILSI DGEPASDGRR SMNQVARTKP GDKIRIEVMR
NGKSLTLTAE VGIRPPINGN
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