| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0884 |
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| Symbol | hisD |
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| ID | 5108978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1001798 |
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| End bp | 1003108 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640502100 |
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| Product | histidinol dehydrogenase |
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| Protein accession | YP_001186384 |
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| Protein GI | 146305919 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0141] Histidinol dehydrogenase |
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| TIGRFAM ID | [TIGR00069] histidinol dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.461967 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCTC CCATTGCCGT TCGTCGACTC AACGCCGCTG ACCAGGACTT CGCCCGACAC
CTGGATCATC TGCTGAGCTG GGAAAGCGTC TCCGACGATG GCGTCAATCA GCGTGTGCTG
GAAATCATCC AGGCCGTGCG CGAGCGTGGC GATGCCGCGC TGGTCGAATA CACCCAGCGC
TTCGATGGCC TGGAGGTCGC CTCCATGGCC GACCTGATCC TGCCGCGCGA GCGTCTGGAA
CTGGCCCTCG AACGTATTTC CCCCGCACAG CGCCAGGCGC TGGAAGTCGC CGCCGAGCGC
GTGCGCAGCT ACCACGAGAA GCAGAAGCAG GATTCCTGGC GCTACAGCGA GGCCGACGGC
ACCGTGCTGG GGCAGAAGGT CACGCCGCTG GATCGCGCCG GTCTGTATGT GCCGGGCGGC
AAGGCTTCCT ATCCATCCTC GGTATTGATG AACGCCATCC CGGCCAAGGT CGCCGGTGTG
CCCGAGGTGG TCATGGTGGT GCCGACCCCG CGCGGCGAGA TCAACGAGAT CGTCCTGGCT
GCCGCCGCCA TCGCCGGCGT CGACCGCGTG TTCACCATCG GTGGCGCCCA GGCCGTGGCG
GCGCTGGCCT ATGGCACCGA GAGCGTGCCG CCGGTGGACA AGATCGTCGG CCCAGGCAAC
ATCTACGTGG CCACCGCCAA GCGCCACGTG TTCGGCAAGG TAGGCATCGA CATGATTGCC
GGGCCTTCTG AAATTCTGGT GGTGTGCGAT GGCCAGACCG ATCCAGACTG GATCGCCATG
GACCTGTTCT CCCAGGCCGA GCACGACGAG GACGCCCAGT CGATCCTGGT CAGTCCCGAC
GCCGCCTTTC TCGACCGCGT TGCCGCAAGC ATCGCCAACC TGCTGCCGAC CATGGAGCGT
GCCGAGATCA TCCGCACCTC GCTGGAAGGC CGTGGGGCGC TGATTCAGGT GGCCGACATG
GCCCAGGCCA TCGAGGTGGC CAACCGCATC GCCCCCGAGC ACCTGGAGCT GTCGGTGGCC
GATCCGGAAG CCTGGCTGCC CGAGATCCGT CACGCCGGCG CGATCTTCAT GGGCAGGTAC
ACCGCGGAGG CCTTGGGCGA CTACGTGGCC GGCCCCAATC ACGTGCTGCC GACTTCCGGC
ACCGCGCGCT TTTCCTCGCC GCTGGGGGTG TACGACTTCC AGAAGCGCTC GTCGATCATC
TTCTGCTCGC CGGACGGTGC ATCGGAGCTG GGCAAGAGCG CCTCGGTGCT GGCCCGTGGC
GAGTCGCTGA CCGCGCACGC GCGCAGCGCC GAGTACCGCA TCAAGCCCTG A
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| Protein sequence | MTAPIAVRRL NAADQDFARH LDHLLSWESV SDDGVNQRVL EIIQAVRERG DAALVEYTQR
FDGLEVASMA DLILPRERLE LALERISPAQ RQALEVAAER VRSYHEKQKQ DSWRYSEADG
TVLGQKVTPL DRAGLYVPGG KASYPSSVLM NAIPAKVAGV PEVVMVVPTP RGEINEIVLA
AAAIAGVDRV FTIGGAQAVA ALAYGTESVP PVDKIVGPGN IYVATAKRHV FGKVGIDMIA
GPSEILVVCD GQTDPDWIAM DLFSQAEHDE DAQSILVSPD AAFLDRVAAS IANLLPTMER
AEIIRTSLEG RGALIQVADM AQAIEVANRI APEHLELSVA DPEAWLPEIR HAGAIFMGRY
TAEALGDYVA GPNHVLPTSG TARFSSPLGV YDFQKRSSII FCSPDGASEL GKSASVLARG
ESLTAHARSA EYRIKP
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