| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0882 |
|---|
| Symbol | |
|---|
| ID | 5108976 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 999710 |
|---|
| End bp | 1000975 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640502098 |
|---|
| Product | UDP-N-acetylglucosamine 1-carboxyvinyltransferase |
|---|
| Protein accession | YP_001186382 |
|---|
| Protein GI | 146305917 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0766] UDP-N-acetylglucosamine enolpyruvyl transferase |
|---|
| TIGRFAM ID | [TIGR01072] UDP-N-acetylglucosamine 1-carboxyvinyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.237249 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAAAC TGATCATTAC CGGCGGCGTT CGCCTCGATG GCGAAATCCG CATTTCCGGG
GCGAAGAACT CCGCCCTGCC GATTCTCGCA GCGACCCTGC TGGGCGACGA GCCCGTCACC
ATCTGCAACC TGCCGCATCT GCACGACATC ACCACCATGA TCGAGTTGTT CGGTCGCATG
GGCGTCGAGC CGGTGATCGA CGAGAAGCTG TCCGTGGAGG TCGATGCACG TTCGATCAAG
ACCCTGGTGG CGCCCTACGA GCTGGTGAAG ACCATGCGCG CCTCGATCCT GGTGCTCGGC
CCCATGGTCG CGCGCTTCGG CGAGGCCGAA GTGGCCCTGC CCGGCGGTTG CGCCATCGGT
TCGCGTCCGG TCGACCTGCA CATCCGCGGT CTCGAGGCCA TGGGCGCGCA GATCGACGTG
GAAGGCGGCT ACATCAAGGC CAAGGCGCCC GAGGGCGGCC TGCGCGGTGC GCATTTCTTC
TTCGACGTGG TCAGCGTGAC CGGCACCGAG AACATCATGA TGGCCGCGAC CCTGGCCAAG
GGCCGCAGCG TGCTGGAAAA CGCCGCGCGT GAGCCCGAAG TGGTCGACCT GGCCAACTGC
CTGATCGCCA TGGGGGCGAA GATCCAGGGC GCCGGCACCG ACACCATCAT CATCGATGGC
GTCGAGCGCC TGCATGGCGC GCGTTTCAAC GTGATGCCCG ACCGTATCGA AACCGGCACC
TACCTGGTGG CCGCTGCCGT CACCGGCGGT CGGGTCAAGG TCAAGGACGC CGATCCGTCG
ACCCTGGAGG CCGTGCTGGC CAAGCTGCAG GAAGCCGGCG CCGAGATCAC CACCGGTCCG
GACTGGATCG AGCTGGACAT GAAGGGCAAG CGTCCCAAGG CCGTCAACCT GCGTACCGCT
CCGTATCCGG CGTTCCCTAC CGACATGCAG GCGCAGTTCA TCGCCCTCAA TGCCGTGGCC
GAAGGCACCG GTACGGTGAT CGAAACCGTC TTTGAAAATC GCTTTATGCA CGTCTACGAG
ATGCTGCGCA TGGGCGCCAA CATTCTGGTC GAGGGCAACA CCGCCATCGT CACCGGCGTC
GAGAAGCTCA AGGGCGCACC GGTCATGGCC ACCGACCTGC GCGCGTCGGC CAGCCTGGTA
CTGGCGGCGC TGATGGCCGA GGGCGATACC CTGATCGACC GCATCTACCA CATCGACCGC
GGTTACGAGT GCATCGAGGA GAAGCTGCAA CTTCTCGGCG CCAAGATCCG CCGCGTACCG
GGCTAA
|
|---|
| Protein sequence | MDKLIITGGV RLDGEIRISG AKNSALPILA ATLLGDEPVT ICNLPHLHDI TTMIELFGRM
GVEPVIDEKL SVEVDARSIK TLVAPYELVK TMRASILVLG PMVARFGEAE VALPGGCAIG
SRPVDLHIRG LEAMGAQIDV EGGYIKAKAP EGGLRGAHFF FDVVSVTGTE NIMMAATLAK
GRSVLENAAR EPEVVDLANC LIAMGAKIQG AGTDTIIIDG VERLHGARFN VMPDRIETGT
YLVAAAVTGG RVKVKDADPS TLEAVLAKLQ EAGAEITTGP DWIELDMKGK RPKAVNLRTA
PYPAFPTDMQ AQFIALNAVA EGTGTVIETV FENRFMHVYE MLRMGANILV EGNTAIVTGV
EKLKGAPVMA TDLRASASLV LAALMAEGDT LIDRIYHIDR GYECIEEKLQ LLGAKIRRVP
G
|
|---|
| |