| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0877 |
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| Symbol | |
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| ID | 5108971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 997110 |
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| End bp | 997907 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640502093 |
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| Product | hypothetical protein |
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| Protein accession | YP_001186377 |
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| Protein GI | 146305912 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
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| TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.544199 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAGAA TTTCACCGCT CGAACGGCTG CGTCTGTTCG GTCGTGCGGG TATCGATGTG
GTGGCGACCC TGGGGCGCTC GGTGCTGTTT CTCGTCGGCG CGGTGTTCGG CCGCAGTCGC
GCCGGCAAGC CGCTGCAGCT GCTGATCAAG CAGCTGTTCG CCGTGGGCGT GATGTCCCTG
GCGATCATCG TCGTTTCCGG CATTTTCATC GGCATGGTAC TGGCTCTGCA GGGCTACAAC
ATCCTGGTCA GTTACGGCTC CGAGCAGGCG GTTGGGCAGA TGGTCGCCCT GACCCTGCTG
CGCGAACTGG GGCCGGTGGT CACCGCATTG CTGTTCGCCG GTCGCGCGGG GTCCGCGCTG
ACCGCCGAAA TCGGCAACAT GAAGTCCACC GAGCAGCTGT CCAGCCTGGA AATGATCGGC
GTCGACCCGC TCAAGTACAT CATCGCGCCG CGCCTGTGGG CCGGCTTCAT CTCCATGCCG
CTGCTGGCGA TGATCTTCAG TGTCGTCGGC ATCTGGGGCG GGGCGATGGT CGCCGTCGAC
TGGCTGGGTG TCTACGAGGG CTCGTTCTGG TCCAACATGC AGAACAGTGT TTCCTTTTAT
GACGACGTGC TCAACGGCGT GATCAAGAGC ATCGTCTTCG CCTTCGTGGT GACCTGGATC
GCCGTGTTCC AGGGCTATGA CTGCGAACCC ACTTCCGAAG GCATCAGCCG CGCGACCACG
CGTACCGTGG TGTATGCCTC GCTGGCCGTG CTTGGCCTGG ATTTCATTCT GACCGCTTTG
ATGTTTGGAG ATTTCTGA
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| Protein sequence | MRRISPLERL RLFGRAGIDV VATLGRSVLF LVGAVFGRSR AGKPLQLLIK QLFAVGVMSL
AIIVVSGIFI GMVLALQGYN ILVSYGSEQA VGQMVALTLL RELGPVVTAL LFAGRAGSAL
TAEIGNMKST EQLSSLEMIG VDPLKYIIAP RLWAGFISMP LLAMIFSVVG IWGGAMVAVD
WLGVYEGSFW SNMQNSVSFY DDVLNGVIKS IVFAFVVTWI AVFQGYDCEP TSEGISRATT
RTVVYASLAV LGLDFILTAL MFGDF
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