Gene Pmen_0864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0864 
Symbol 
ID5108958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp987031 
End bp987549 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content64% 
IMG OID640502080 
Producthypothetical protein 
Protein accessionYP_001186364 
Protein GI146305899 
COG category[S] Function unknown 
COG ID[COG3028] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGATT CCTACGACGA CTTCTCCCTG GAGAAGAGCA AATCCCAGGT CAAACGCGAA 
CTGCATGCCC TGCAGGATCT CGGCGAGCGC CTGACCACGC TCAAGGCGGA TCTGCTGGCC
AAGCTGCCGC TGACCGATGC CCTGCGCCGC GCCCTGGCCG AAGCGCCGAA ACACACCGCC
AATGCCGCGC GCAAGCGTCA TATCCAGTTC ATCGGCAAGC TGATGCGTGA ACAGGATATC
GAGGCGATCC TCGCCCTGAT CGACCAGGTG GACAGCTCCA CCCGTGAATA CAACGAGCGC
TTCCACGCCC TGGAACGCTG GCGCGACCGC CTGATCGGCG AAGGCGACAG CGCGCTGGAA
GGTTTCGTCG AGCTCTACCC CGACGCCGAC CGCCAGCACC TGCGCGGGCT GATCCGTCAT
GCCCAGCACG AGGCCGCGCA TAACAAGCCA CCGGCCGCTG CGCGCAAGGT GTTCAAGTAC
ATCCGCGAGC TGGACGAGAT ACAACGCGGT CTGCGCTGA
 
Protein sequence
MSDSYDDFSL EKSKSQVKRE LHALQDLGER LTTLKADLLA KLPLTDALRR ALAEAPKHTA 
NAARKRHIQF IGKLMREQDI EAILALIDQV DSSTREYNER FHALERWRDR LIGEGDSALE
GFVELYPDAD RQHLRGLIRH AQHEAAHNKP PAAARKVFKY IRELDEIQRG LR