Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0864 |
Symbol | |
ID | 5108958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 987031 |
End bp | 987549 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640502080 |
Product | hypothetical protein |
Protein accession | YP_001186364 |
Protein GI | 146305899 |
COG category | [S] Function unknown |
COG ID | [COG3028] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTGATT CCTACGACGA CTTCTCCCTG GAGAAGAGCA AATCCCAGGT CAAACGCGAA CTGCATGCCC TGCAGGATCT CGGCGAGCGC CTGACCACGC TCAAGGCGGA TCTGCTGGCC AAGCTGCCGC TGACCGATGC CCTGCGCCGC GCCCTGGCCG AAGCGCCGAA ACACACCGCC AATGCCGCGC GCAAGCGTCA TATCCAGTTC ATCGGCAAGC TGATGCGTGA ACAGGATATC GAGGCGATCC TCGCCCTGAT CGACCAGGTG GACAGCTCCA CCCGTGAATA CAACGAGCGC TTCCACGCCC TGGAACGCTG GCGCGACCGC CTGATCGGCG AAGGCGACAG CGCGCTGGAA GGTTTCGTCG AGCTCTACCC CGACGCCGAC CGCCAGCACC TGCGCGGGCT GATCCGTCAT GCCCAGCACG AGGCCGCGCA TAACAAGCCA CCGGCCGCTG CGCGCAAGGT GTTCAAGTAC ATCCGCGAGC TGGACGAGAT ACAACGCGGT CTGCGCTGA
|
Protein sequence | MSDSYDDFSL EKSKSQVKRE LHALQDLGER LTTLKADLLA KLPLTDALRR ALAEAPKHTA NAARKRHIQF IGKLMREQDI EAILALIDQV DSSTREYNER FHALERWRDR LIGEGDSALE GFVELYPDAD RQHLRGLIRH AQHEAAHNKP PAAARKVFKY IRELDEIQRG LR
|
| |