Gene Pmen_0856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0856 
Symbol 
ID5108950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp975927 
End bp976964 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content64% 
IMG OID640502072 
Productrod shape-determining protein MreB 
Protein accessionYP_001186356 
Protein GI146305891 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1077] Actin-like ATPase involved in cell morphogenesis 
TIGRFAM ID[TIGR00904] cell shape determining protein, MreB/Mrl family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAAGA AACTGCGTGG CATGTTCTCC AGCGATCTTT CGATCGACCT GGGCACTGCC 
AATACCCTTA TTTATGTGCG CGAACGCGGC ATCGTGCTGA ACGAGCCGTC CGTGGTCGCC
ATCCGTACCC ACGGCAACCA GAAGAGTGTC GTGGCCGTCG GCACCGAGGC CAAGCGCATG
CTCGGCCGTA CCCCCGGCAA CATTTCTGCG ATTCGCCCGA TGAAGGATGG CGTGATCGCC
GACTTCAGCG TCTGCGAAAA GATGCTGCAG TACTTCATCA ACAAGGTTCA CGAAAACAGC
TTCCTGCAGC CGTCGCCGCG CGTACTGATC TGCGTGCCGT GCAAATCGAC CCAGGTCGAG
CGTCGCGCCA TCCGCGAATC GGCCCTCGGC GCCGGTGCCC GTGAAGTGTT TCTGATCGAA
GAGCCGATGG CCGCTGCCAT CGGTGCCGGC CTGCCGGTCG AAGAGGCCCG CGGTTCGATG
GTCGTCGATA TCGGCGGCGG TACCACCGAG ATCGCGCTGA TTTCCCTCAA TGGCGTGGTT
TACGCCGAAT CCGTCCGCGT CGGCGGCGAC CGTTTCGACG AAGCCATCAT CACCTACGTG
CGCCGCAACT ACGGCTCGCT GATCGGTGAA GGCACCGCCG AGCGTATCAA GCAGGAAATC
GGCACCGCCT ACCCGGGCGG CGAGATCCGC GAAGTCGACG TGCGCGGTCG CAACCTGGCC
GAGGGCGTGC CGCGCAGCTT CACCCTGAAC TCCAACGAAG TGCTCGAAGC GCTGCAGGAA
TCCCTGGCGA CCATCGTCCA GGCGGTCAAG AGCGCGCTGG AGCAGTCGCC GCCCGAGCTG
GCTTCGGACA TCGCCGAGCG CGGCCTGGTG CTGACCGGTG GCGGCGCGTT GCTGCGCGAC
CTGGACAAGC TGCTGGCCCA GGAAACCGGT CTGCCGGTGA TCGTTGCCGA AGACCCGCTG
ACCTGCGTCG CCCGTGGCGG CGGCAAGGCC CTGGAAATGA TGGATCGCCA CGCCATGGAC
CTGCTCTCCA CCGAGTAA
 
Protein sequence
MFKKLRGMFS SDLSIDLGTA NTLIYVRERG IVLNEPSVVA IRTHGNQKSV VAVGTEAKRM 
LGRTPGNISA IRPMKDGVIA DFSVCEKMLQ YFINKVHENS FLQPSPRVLI CVPCKSTQVE
RRAIRESALG AGAREVFLIE EPMAAAIGAG LPVEEARGSM VVDIGGGTTE IALISLNGVV
YAESVRVGGD RFDEAIITYV RRNYGSLIGE GTAERIKQEI GTAYPGGEIR EVDVRGRNLA
EGVPRSFTLN SNEVLEALQE SLATIVQAVK SALEQSPPEL ASDIAERGLV LTGGGALLRD
LDKLLAQETG LPVIVAEDPL TCVARGGGKA LEMMDRHAMD LLSTE