Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0854 |
Symbol | gatA |
ID | 5108948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 973935 |
End bp | 975386 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640502070 |
Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
Protein accession | YP_001186354 |
Protein GI | 146305889 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATCAAA TGACCCTCGC CGAGATCGCC AAGGGCCTCG AGGCCAAGCA GTTCTCCGCC GAAGAGCTGA GCCGCGCCCT GCTGGCGCGC ATCGCGCAGC TCGACCCGCA GCTCAACAGT TTCATCACCG TCACCGAAGA TCTGGCCATC GAACAGGCCA AGGCCGCCGA CGCCCGCCGC GCCGCCGGTG AAAACGGCGC CCTGCTCGGT GCCCCGATCG CCCACAAGGA CCTGTTCTGC ACCAACGGCG TGCTGACCTC CTGCGGCTCG AAGATCCTCA CCGGCTTCAA GGCGCCCTAC GACGCCACCG TGGTGGAGAA GCTCAAGGCC GCCGGCACCG TCACCCTCGG CAAGCTGAAC ATGGACGAGT TCGCCATGGG CTCGGCCAAC GAATCCAGCC ACTACGGCGC GGTGAAGAAC CCCTGGGACA CCAGCCGCGT ACCCGGCGGC TCCTCCGGTG GTTCCGCCGC CGCAGTCGCA GCGCGCCTGC TGCCGGCCGC CACCGGCACC GACACCGGCG GCTCGATCCG TCAGCCGGCG GCGCTGACCA ACCTCACCGG CATCAAGCCC ACCTACGGCC GCGTTTCGCG CTGGGGCATG ATCGCCTACG CCTCCAGCCT CGACCAGGGC GGCCCGCTGG CCCGCGATGC CTTCGACTGC GCCCTGCTGC TCGGCGCCAT GGCCGGCTTC GACGCCAAGG ATTCCACCAG CGTCGATCAG CCGGTGGATG ATTACCTGGC TGCGCTGGCC CAGCCGCTGG CCGGCCTACG CATCGGCCTG CCCAAGGAAT ACTTCGGTGC CGGCCTCGAC GCGCGTATCG GTGAGAAGGT GATGGCCGTG GTCGAGGAGC TGAAAAAGCT CGGCGCCACC GTCAAGGACA TCTCGCTGCC GAACATGCAG CATGCGATTC CCGCCTACTA CGTGATCGCC CCGGCAGAAG CCAGCTCCAA CCTGTCGCGC TTCGATGGCG TGCGCTTCGG CTATCGCTGC GAAAACCCGG TGAACCTCGA AGACCTGTAT AAGCGTTCGC GTGGCGAAGG CTTCGGTGCC GAGGTGAAAC GGCGCATCAT GGTCGGCACC TACGCGCTGT CGGCCGGCTA TTACGACGCC TACTACATCA AGGCGCAGCA GATCCGCCGC CTGATCAAGA ACGACTTCGT CGCCGCCTTC AAGGACGTCG ACGTGATCCT CGGCCCGACC ACGCCGAACC TGGCCTGGAA GCTGGGCGAG AAGAACGCCG ACCCGGTGTC CGCCTACCTG GAAGACATCT ACACCATCAC CGCCAACCTG GCCGGCATCC CCGGCCTGTC GATGCCGGCC GGCTTCGTCG ATGGCCTGCC GGTGGGCGTG CAGCTGCTCG GCAACTACTT CCAGGAAGGT CGTCTGCTCA ATGTCGCGCA CCAGTACCAA CAGGTCAGCG ACTGGCACAA ACAAGCACCG ACTGGTTTCT GA
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Protein sequence | MHQMTLAEIA KGLEAKQFSA EELSRALLAR IAQLDPQLNS FITVTEDLAI EQAKAADARR AAGENGALLG APIAHKDLFC TNGVLTSCGS KILTGFKAPY DATVVEKLKA AGTVTLGKLN MDEFAMGSAN ESSHYGAVKN PWDTSRVPGG SSGGSAAAVA ARLLPAATGT DTGGSIRQPA ALTNLTGIKP TYGRVSRWGM IAYASSLDQG GPLARDAFDC ALLLGAMAGF DAKDSTSVDQ PVDDYLAALA QPLAGLRIGL PKEYFGAGLD ARIGEKVMAV VEELKKLGAT VKDISLPNMQ HAIPAYYVIA PAEASSNLSR FDGVRFGYRC ENPVNLEDLY KRSRGEGFGA EVKRRIMVGT YALSAGYYDA YYIKAQQIRR LIKNDFVAAF KDVDVILGPT TPNLAWKLGE KNADPVSAYL EDIYTITANL AGIPGLSMPA GFVDGLPVGV QLLGNYFQEG RLLNVAHQYQ QVSDWHKQAP TGF
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