Gene Pmen_0854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0854 
SymbolgatA 
ID5108948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp973935 
End bp975386 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content66% 
IMG OID640502070 
Productaspartyl/glutamyl-tRNA amidotransferase subunit A 
Protein accessionYP_001186354 
Protein GI146305889 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 
TIGRFAM ID[TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCAAA TGACCCTCGC CGAGATCGCC AAGGGCCTCG AGGCCAAGCA GTTCTCCGCC 
GAAGAGCTGA GCCGCGCCCT GCTGGCGCGC ATCGCGCAGC TCGACCCGCA GCTCAACAGT
TTCATCACCG TCACCGAAGA TCTGGCCATC GAACAGGCCA AGGCCGCCGA CGCCCGCCGC
GCCGCCGGTG AAAACGGCGC CCTGCTCGGT GCCCCGATCG CCCACAAGGA CCTGTTCTGC
ACCAACGGCG TGCTGACCTC CTGCGGCTCG AAGATCCTCA CCGGCTTCAA GGCGCCCTAC
GACGCCACCG TGGTGGAGAA GCTCAAGGCC GCCGGCACCG TCACCCTCGG CAAGCTGAAC
ATGGACGAGT TCGCCATGGG CTCGGCCAAC GAATCCAGCC ACTACGGCGC GGTGAAGAAC
CCCTGGGACA CCAGCCGCGT ACCCGGCGGC TCCTCCGGTG GTTCCGCCGC CGCAGTCGCA
GCGCGCCTGC TGCCGGCCGC CACCGGCACC GACACCGGCG GCTCGATCCG TCAGCCGGCG
GCGCTGACCA ACCTCACCGG CATCAAGCCC ACCTACGGCC GCGTTTCGCG CTGGGGCATG
ATCGCCTACG CCTCCAGCCT CGACCAGGGC GGCCCGCTGG CCCGCGATGC CTTCGACTGC
GCCCTGCTGC TCGGCGCCAT GGCCGGCTTC GACGCCAAGG ATTCCACCAG CGTCGATCAG
CCGGTGGATG ATTACCTGGC TGCGCTGGCC CAGCCGCTGG CCGGCCTACG CATCGGCCTG
CCCAAGGAAT ACTTCGGTGC CGGCCTCGAC GCGCGTATCG GTGAGAAGGT GATGGCCGTG
GTCGAGGAGC TGAAAAAGCT CGGCGCCACC GTCAAGGACA TCTCGCTGCC GAACATGCAG
CATGCGATTC CCGCCTACTA CGTGATCGCC CCGGCAGAAG CCAGCTCCAA CCTGTCGCGC
TTCGATGGCG TGCGCTTCGG CTATCGCTGC GAAAACCCGG TGAACCTCGA AGACCTGTAT
AAGCGTTCGC GTGGCGAAGG CTTCGGTGCC GAGGTGAAAC GGCGCATCAT GGTCGGCACC
TACGCGCTGT CGGCCGGCTA TTACGACGCC TACTACATCA AGGCGCAGCA GATCCGCCGC
CTGATCAAGA ACGACTTCGT CGCCGCCTTC AAGGACGTCG ACGTGATCCT CGGCCCGACC
ACGCCGAACC TGGCCTGGAA GCTGGGCGAG AAGAACGCCG ACCCGGTGTC CGCCTACCTG
GAAGACATCT ACACCATCAC CGCCAACCTG GCCGGCATCC CCGGCCTGTC GATGCCGGCC
GGCTTCGTCG ATGGCCTGCC GGTGGGCGTG CAGCTGCTCG GCAACTACTT CCAGGAAGGT
CGTCTGCTCA ATGTCGCGCA CCAGTACCAA CAGGTCAGCG ACTGGCACAA ACAAGCACCG
ACTGGTTTCT GA
 
Protein sequence
MHQMTLAEIA KGLEAKQFSA EELSRALLAR IAQLDPQLNS FITVTEDLAI EQAKAADARR 
AAGENGALLG APIAHKDLFC TNGVLTSCGS KILTGFKAPY DATVVEKLKA AGTVTLGKLN
MDEFAMGSAN ESSHYGAVKN PWDTSRVPGG SSGGSAAAVA ARLLPAATGT DTGGSIRQPA
ALTNLTGIKP TYGRVSRWGM IAYASSLDQG GPLARDAFDC ALLLGAMAGF DAKDSTSVDQ
PVDDYLAALA QPLAGLRIGL PKEYFGAGLD ARIGEKVMAV VEELKKLGAT VKDISLPNMQ
HAIPAYYVIA PAEASSNLSR FDGVRFGYRC ENPVNLEDLY KRSRGEGFGA EVKRRIMVGT
YALSAGYYDA YYIKAQQIRR LIKNDFVAAF KDVDVILGPT TPNLAWKLGE KNADPVSAYL
EDIYTITANL AGIPGLSMPA GFVDGLPVGV QLLGNYFQEG RLLNVAHQYQ QVSDWHKQAP
TGF