| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0850 |
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| Symbol | |
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| ID | 5108944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 970414 |
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| End bp | 970797 |
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| Gene Length | 384 bp |
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| Protein Length | 127 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640502066 |
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| Product | 4-carboxymuconolactone decarboxylase |
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| Protein accession | YP_001186350 |
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| Protein GI | 146305885 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
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| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain
[TIGR02425] 4-carboxymuconolactone decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.89978 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACA ACCATGACCG CGGCGTGCAG GTGCGCCGCG AGGTGATGGG CGACGCCTTC
GTCGACCGTG CCCTGGGCAA TGCCACCGAG TTCACCCAGC CGCTGCAGGA CTTCGTCAAC
GAACACGCCT GGGGTGGCGT GTGGACCCGC AGCGGCCTGC CGCGCGCGAC CCGCAGCCTG
ATCACCCTGG CAGCGCTGAC CGCGCTGAAA TGCCCGCAGG AACTCAAGGG CCACGTGCGC
GGCGCGCTGA ACAACGGCTG CACCGTCGAG GAAATCCGCG AGACCCTGCT GCACTGCGCG
GTCTACGCCG GCGTACCGGC CAGCATCGAT GCCTTCCGCG CGGCGCAGGA AGTGATCGAG
GAATACCAGC GCAACGCTTC CTAG
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| Protein sequence | MTDNHDRGVQ VRREVMGDAF VDRALGNATE FTQPLQDFVN EHAWGGVWTR SGLPRATRSL
ITLAALTALK CPQELKGHVR GALNNGCTVE EIRETLLHCA VYAGVPASID AFRAAQEVIE
EYQRNAS
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