| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0839 |
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| Symbol | |
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| ID | 5108933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 957049 |
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| End bp | 957951 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640502055 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001186339 |
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| Protein GI | 146305874 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCCG CTACCAGCCT CGACCAGAGC CTGCTCTACC CCTCGCCACT GAAGGATTTC
TGGCAGGCCT TCAGCCACAA CAAGGGCGCG CTTGGCGGCC TGGCGTTCAT GCTGCTGATG
GTGTTCTGTG CGTTGTTCGC TCCCTGGGTC GCGCCGCACC ATCCCAGCGA ACAGTACCGC
GACTTCCTGC TCACCCCGCC GGTATGGCTG GACGGCGGCC AGTGGCGCTT TTTGCTCGGC
ACCGACGAGC TGGGCCGCGA CCTGCTCTCG CGGCTGATCC ATGGCGCGCG CCTGTCACTG
ATGATCGGCC TGGCCTCGGT GGTGCTGTCG CTGATCCCCG GCATCCTGCT GGGCCTGGCT
GCCGGTTTTT TCCCGCGTCT GCTCGGCCCG TCGATCATGC GCCTGATGGA CATCATGCTG
GCGTTGCCGT CGCTGCTGCT GGCGGTGGCC ATCGTCGCCA TCCTCGGCCC TGGGCTGATC
AACACCATCT TCGCCATCGC CATCGTCTCG CTGCCGTCCT ACGTGCGCCT GACCCGCGCG
GCGGTAATGG GCGAACTGGG CCGCGACTAC GTCACCGCTG CGCAATTGTC GGGCGCGGGC
CTGCTGCGGC TGATGTTCGT CACCGTGCTG CCCAACTGCA TGGCGCCGTT GATCGTACAG
GCCACGTTGA GCTTTTCCTC GGCGATTCTC GATGCCGCCG CCCTGGGCTT TCTCGGCCTG
GGCGTGCAGC CGCCCACGCC CGAGTGGGGC ACCATGCTGG CCTCGGCGCG CGACTACATC
GAACGTGCCT GGTGGGTGGT GACCCTGCCC GGTCTGGCCA TCCTGCTCAG CGTGCTGGCC
ATCAACCTGA TGGGCGACGG CCTGCGCGAT GCGCTCGACC CGAAACTGAA GAACGCCATC
TGA
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| Protein sequence | MTAATSLDQS LLYPSPLKDF WQAFSHNKGA LGGLAFMLLM VFCALFAPWV APHHPSEQYR
DFLLTPPVWL DGGQWRFLLG TDELGRDLLS RLIHGARLSL MIGLASVVLS LIPGILLGLA
AGFFPRLLGP SIMRLMDIML ALPSLLLAVA IVAILGPGLI NTIFAIAIVS LPSYVRLTRA
AVMGELGRDY VTAAQLSGAG LLRLMFVTVL PNCMAPLIVQ ATLSFSSAIL DAAALGFLGL
GVQPPTPEWG TMLASARDYI ERAWWVVTLP GLAILLSVLA INLMGDGLRD ALDPKLKNAI
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