| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0838 |
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| Symbol | |
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| ID | 5108932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 955972 |
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| End bp | 956946 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640502054 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_001186338 |
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| Protein GI | 146305873 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTGC TGGATATCCG CAACCTCTCG GTGCGCTTCG GCGCTGCCGA CGCCGTGCCG
GTGGTCGACG GTCTCGACCT GCGCGTGGAC AAGGGTGAGG TGCTGGCCAT CGTCGGCGAG
TCCGGCTCCG GCAAGTCGGT GACCATGATG GCGCTGATGG GCCTGATCGA TGCGCCCGGC
ATCGTACAGG CCGACTGCCT GCAGTTCGAC GGCACCGACA TGCTGCGCCT GAAGGGCCGC
CAGCGTCGGC ATATCGTCGG CAAGGACCTG GCCATGGTGT TCCAGGATCC GATGACCGCC
CTCAACCCCA GCTACACCGT GGGCTTCCAG ATCGAGGAAG TGCTGCGCCA GCACCTCGGT
CTGAAAGGCA AGGCGGCGCG GGCCCGTGCC CTGCAGCTGC TGGAAAGGGT GGAGATCCCC
GGCGCCGCCA GCCGCCTCGA TGCCTACCCG CACCAGCTTT CCGGCGGCAT GAGCCAGCGC
GTGGCAATCG CCATGGCGAT CGCCGCCGAA CCCAAGCTGC TGATCGCCGA CGAACCCACC
ACCGCGCTGG ACGTGACCAT CCAGGCGCAG ATCATGGAGC TGCTGCTGAA TCTGCAGCGC
GATGAAGGCA TGGCCCTGGT GCTGATCACC CACGACCTGG CGGTGGTCGC CGAAACCGCT
CAGCGCGTCT GCGTGATGTA TGCAGGACAG GCGGTGGAAC TGGGCCGGGT GCCGACCCTG
TTCGACGCGC CCAGCCACCC CTACACCGAG GCACTGCTCA AGGCCATTCC CGAACACAGT
GCCGGCGCCC ATCGTCTGGC CACGCTGCCG GGCATCGTTC CCGGTCGCTA CGACCGTCCG
CAGGGCTGCC TGCTGTCGCC ACGCTGCCCC TACGTGCAGG AGCGCTGCCG CCAGCAACGC
CCGACGCTGG ACGCACACGA GCGAGGCGCC GCGCGCTGCT TCTTCCCTCT GGTACCCACG
GCGGAGGTGG CCTGA
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| Protein sequence | MSLLDIRNLS VRFGAADAVP VVDGLDLRVD KGEVLAIVGE SGSGKSVTMM ALMGLIDAPG
IVQADCLQFD GTDMLRLKGR QRRHIVGKDL AMVFQDPMTA LNPSYTVGFQ IEEVLRQHLG
LKGKAARARA LQLLERVEIP GAASRLDAYP HQLSGGMSQR VAIAMAIAAE PKLLIADEPT
TALDVTIQAQ IMELLLNLQR DEGMALVLIT HDLAVVAETA QRVCVMYAGQ AVELGRVPTL
FDAPSHPYTE ALLKAIPEHS AGAHRLATLP GIVPGRYDRP QGCLLSPRCP YVQERCRQQR
PTLDAHERGA ARCFFPLVPT AEVA
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