| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0832 |
|---|
| Symbol | |
|---|
| ID | 5108926 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 946713 |
|---|
| End bp | 948005 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640502048 |
|---|
| Product | xanthine/uracil/vitamin C permease |
|---|
| Protein accession | YP_001186332 |
|---|
| Protein GI | 146305867 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2252] Permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGAAA GACTGTTCCA ACTCAAAGCC CACAACACCT CGGTACGCAC CGAGGTACTG
GCCGGGATCA CCACCTTCCT GACCATGGCC TACATCCTCT TCGTCAACCC CAACATGCTG
GCCGAGACCG GCATGGATCA CGGCGCGGTG TTCGTCGCCA CCTGCCTGGC CGCCGCCATC
GGCTCGCTGA TCATGGGTCT TCTGGCCAAC TACCCGATCG CCCTGGCGCC GGGCATGGGC
CTCAATGCCT TCTTCACCTA CACCGTGGTC ATGACCATGG GCTACAGCTG GCAGACCGCC
CTGGGCGCGG TGTTCCTCTC CGGTGCGATC TTCTTCCTGC TGTCGATCTT CAAGATCCGC
GAGTGGATCA TCAACAGCAT CCCCCTGGCC CTGCGTGCCG GCATCGCCGC CGGTATCGGC
CTGTTCCTGG CGATCATCGC GCTGAAGAAC GCCGGCATCG TGGTCGACCA CCCGGCCACC
CTGGTCGGCC TGGGCGACAT GAGCAAGGGC GGCGCGCTGC TGGCCTGCCT GGGCTTCTTC
GTCATCGCCG CACTGGCCTA TCGCAAGGTC ACCGGCGCAG TGATGATCGG CATCCTGCTG
GTCACCGGCC TGTCCATCGT GCTCGGCCTG TCCGAGCTGC CGGGCGTGGT CTCGATGCCG
CCGTCGCTGA TGCCGACCCT GCTGCAGCTG GATATCGCCG GCGCACTGGA TATCGGCCTG
ATCAGCGTGA TCTTCGCCTT CCTCTTCGTC GATCTGTTCG ACACCTCCGG CACCCTGGTC
GGCGTCGCGC AGAAGGCCGA CCTGCTGGAC AAGGACGGCA AGATGCCGCG CCTGGGCCGC
GCGCTGATGG CCGACAGCAC CGCCACCATG GCCGGCGCCG CGCTGGGCAC CAGCACCACC
ACCAGCTACA TCGAATCGGC TGCCGGCATC AGCGCCGGCG GGCGCACCGG TCTGACCGCC
TGCGTGGTCG CCGCGCTGTT CCTGCTCAGC CTGTTCTTCG CCCCGCTGGC CGGCTCGGTG
CCGGCCTACG CCACCGCTCC GGCGCTGCTG TTCGTCGCCG TGCTGATGAT GAGCAGCCTG
GCGCAAATCG ACTGGGACGA CCTGACCGTC GCCGCCCCGG TGGTGGTCGC CGCCCTGGCC
ATGCCGCTGA CCTTCTCCAT CGCCAACGGC ATCGCCTTCG GCTTCATCGC CTGGACCGCG
GTCAAGGTGC TGTCCGGCCG CTGGCGTGAA CTGAACCCGG CGATGTGGGT GCTCTCTGCC
CTGTTCATCG TCAAGCTGGC TTACTTCGCC TGA
|
|---|
| Protein sequence | MLERLFQLKA HNTSVRTEVL AGITTFLTMA YILFVNPNML AETGMDHGAV FVATCLAAAI
GSLIMGLLAN YPIALAPGMG LNAFFTYTVV MTMGYSWQTA LGAVFLSGAI FFLLSIFKIR
EWIINSIPLA LRAGIAAGIG LFLAIIALKN AGIVVDHPAT LVGLGDMSKG GALLACLGFF
VIAALAYRKV TGAVMIGILL VTGLSIVLGL SELPGVVSMP PSLMPTLLQL DIAGALDIGL
ISVIFAFLFV DLFDTSGTLV GVAQKADLLD KDGKMPRLGR ALMADSTATM AGAALGTSTT
TSYIESAAGI SAGGRTGLTA CVVAALFLLS LFFAPLAGSV PAYATAPALL FVAVLMMSSL
AQIDWDDLTV AAPVVVAALA MPLTFSIANG IAFGFIAWTA VKVLSGRWRE LNPAMWVLSA
LFIVKLAYFA
|
|---|
| |