| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0831 |
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| Symbol | |
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| ID | 5108925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 945566 |
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| End bp | 946654 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640502047 |
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| Product | tRNA (uracil-5-)-methyltransferase |
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| Protein accession | YP_001186331 |
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| Protein GI | 146305866 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR02143] tRNA (uracil-5-)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCCC CCGTATTCGA CCCCGCCACC TACGACGCCC AGCTCGCCGA GAAGCAGCAG
CGCCTGATCG AGCTGCTGGC GCCCTTCGCC GCTCCCGAGC CCGAGGTGTT CGATTCGCCG
CGCGAGCACT ACCGCCTGCG CGCCGAGTTC CGCCTGTGGC GTGAAGACGG CCAGCGCCAC
TACGCGATGT TCGCGCCGGG CGACAAGCAC ACGCCGATCC TGCTCGACGA CTTCCCCATC
GCCAGCCTGC GCATCAACGA GCTGATGCCG CGCCTGCGCG CCGCCTGGCG GGCCAGCGAG
GCGCTGTCGT TCAAGCTGTT CCAGGTGGAA TTTCTCACCA CCCTGGCTGG CGACGCGCTG
ATCACCCTGG CCTACCATCG CCCGCTGGAC GAGGCCTGGC AGGCCGCGGC GGAAAAACTG
GCCAGCGAGC TGAACGTCAG CCTGGTCGGC CGCTCGCGCG GCCAGCGCCT GGTGATCGGC
CGCGACTACG TCGAAGAGGA ACTCACCGTG GCCGGGCGCC GCTTCCGCTA TCGCCAGCCG
GAAGGTGCCT TCACCCAGCC CAACGGCGCG GTGTGCGAGA AGATGCTGGG CTGGGCGTAT
GAGGCTCTCG GCGAACGCGA CGACGACCTG CTGGAGCTGT ATTGCGGCAA CGGCAACTTC
ACCCTGCCGC TGGCCACCCG CGTGCGCCGC GTGCTGGCCA CCGAAATCAG CAAGACCTCG
GTGAACGCCG CCCTGGCCAA CCTGGCTGAC AACGGCGTGA ACAACGTCGA GCTGGTGCGC
CTGTCCGCCG AGGAGCTGAC CCAGGCGCTG AACGAGGTGC GCCCGTTCCG CCGCCTGGCC
GGCATCGACC TGAAAAGCTA CGACTTCGGC AGCGTCTTCG TCGACCCGCC GCGCGCCGGG
ATGGACCCGG ACACCTGCGA GCTGACCCGG CGCTTCGAGC GCATCCTGTA CATCTCCTGC
AACCCCGAGA CCCTGGCCGC CAACATCGCC CAGCTGAGCG ACACCCACCA GGTGACGCGC
TGCGCCCTGT TCGACCAGTT CCCCTACACC CACCATATGG AAGCGGGTGT ATTGCTGGAG
CGGCGCTGA
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| Protein sequence | MSAPVFDPAT YDAQLAEKQQ RLIELLAPFA APEPEVFDSP REHYRLRAEF RLWREDGQRH
YAMFAPGDKH TPILLDDFPI ASLRINELMP RLRAAWRASE ALSFKLFQVE FLTTLAGDAL
ITLAYHRPLD EAWQAAAEKL ASELNVSLVG RSRGQRLVIG RDYVEEELTV AGRRFRYRQP
EGAFTQPNGA VCEKMLGWAY EALGERDDDL LELYCGNGNF TLPLATRVRR VLATEISKTS
VNAALANLAD NGVNNVELVR LSAEELTQAL NEVRPFRRLA GIDLKSYDFG SVFVDPPRAG
MDPDTCELTR RFERILYISC NPETLAANIA QLSDTHQVTR CALFDQFPYT HHMEAGVLLE
RR
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